Anoplopoma fimbria (sablefish): 129106867
Help
Entry
129106867 CDS
T09102
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129106867 (lrrk1)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129106867 (lrrk1)
Protein kinases [BR:
afb01001
]
Serine/threonine kinases: TKL group
LRRK family
129106867 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
Roc
COR-B
COR-A
Ank_2
Ank
LRR_14
Ras
Arf
Beta-prop_LRRK2
Ank_4
Gtr1_RagA
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
129106867
NCBI-ProteinID:
XP_054474110
LinkDB
All DBs
Position
2:32451539..32519386
Genome browser
AA seq
2038 aa
AA seq
DB search
MSYWYVGHPQDSGNTPSSMEQQSGPGEEMGAKASLVEVPGAGSALVPSPTLENIRAAYEG
GEGEAAGELIKQACCLECSAGMPQINGVRLLCEASQHGDLQSVCYLLKEARITVPQEPSD
SNPAILAAYYGHASLVKELLDSIPGPCLRRDLLNWMLATSCQEGHLDVVRLLVHGYDADA
KDCAIHSDEFAVITGLPLYAAARAGNEDVAHFLLQNGAGFSSYTLMDHPAFSKHLLRLKL
QETSNAEGEEAVTVCWRGLQLPWLELDWFMDVSSRITHLDLSSNSLAALPSVVPWGLIHL
QTLDLSNNLFKELPAADNSQEVICSSLQQINLSQNQLTSLPPGLLHLTNIQRLSAAKNQL
RVLFDIPSTTNWIGLRKLEELDVSDNCLTSLPTAVMHCLKSLSLLNVCRNTLSSFPDPWA
CPLKQCKASSNVIERLPNTISIFWRTQLQEVDFSDNSLKELPSYIFELEALVLLKLCGNH
IATLPAPSKWKCSQLRTLDLSRNQLGKTEEGPKSRRLAFLTTWSRRDPDPDPVCPIEFPM
ILRDSLEVLFLNDNQLECVPHSVCGLHSLTELYLSNNPGIRELPAELSQLSNLWQLDIED
LNITNVPQDVRKEGPTSVLAFLRAHLRKAEPFKLLKMLVIGPPRQGKTALVEALQTGRPA
PFTPAECSISTSNWELDKTSGNKNSKDSVAFNVWDIGGQASMSTVNQCFFTDKALYVVIW
NLALGEEAVANLQTWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERLATLRAYVLALCRS
PSGARATGYPDITWKHLHEVSCKTLEGLDVLKKLIYQVALSMKDSSRSACGSKLLGRLIP
RSYLTLQEAVIAEKQRRDAEGEVQYLTDDQLDRIIEQNPGSDIRDYEDLQTAISFLIETG
TLLHFPDTSHGLCTLYFLCPVWLSECLERIMHLKSSRSVARNGVIRAEDLRMLLVGTGFT
EQTEEQYFQFLAKFEIALPVASNSYLLPHLLPPKPAMDIHGFRQQTNNTLQRLVQMSFVP
AGFWERLIARMLISLTMMDLQSFEPKRNTRSQHSRNSVIYSFTGTQQRNRCSTFRVRRSQ
TIYWKEGLLATFDGGYLSVESSDVNWKRKKSGGIKIICQSETRDFSAMAFITDNVNSLIE
QWFPALTASESDGSLLIEQYAPCPLCASLGQQRAELVASLVGQVGEKAAAAAAAAAGGGD
GVHYFNMEDCVLAAVEKEHIICPQHPDQPVTLQELVPELFMTDFPARLFLDTAQLEYSEE
ESNILGQGGSGTIIYRARYRNQPVAIKRFHFKKCRQQTISSDTDTMVKHLQSANACRSFS
EFRQEASMLHSLQHPCIVSLVGISIHPLCFALQLAPLGSLNTVLEEKNKGKGSRYMPLGH
MLTFRVAYQIAAGLAYLHKKSIIFCDLKSDNILVWSLEVRDPINIKLSDYGISRQTFHEG
ALGVEGTPGYQAPEIRPGIVYDEKVDMFSYGMVLYELLSGRRPALGQHQLQIAKKLSKGI
RPALGSPEEVQFYCLHSLLTECWDTKPEKRPVAMQCVRQMQQPSFPCLRYLLSCDSQSQL
FLSQLQGHSAVFWNGDKDDRNYSVVNVEKGQVEVKRMSCAGSRISCQMKMGNILWTATEE
QEVFIYSLKDMCPLSQPQKQFSCPAIITCLFPVPAREQSLARVFAGMSDGLVAVYSLVED
LPLDGETYLCSHTLNKTVFALKDSDPRQRPYPVRSMALVSSGSQLWFSNGPGVLVIDCLS
LQAVRRLEPYNPPSSIVSMTTSFSLWGEEAVWTLDDHMNTLLLYHAASYQLCAKYCCGDS
SPLRDVFAVERPAGVTMSTTTELKTTEQEEKLDWNNGEVTLIYSEEAGTQIIQHQDSQTD
YCSISSSCSLEPLGPDCSSTASLASIASHSSVPPPTEPEDTGRDQDQQDSTKPESDPDTA
ETVSPTPPQLQAFTVLPVNGTLWIPRRGGDMMVIEMQSHGNQLRGRVTAVLSPPGCSSLG
ILEEAALVAKDTVVCGFHKENMEWCLCVWRGWGCRELEVFYQSYEELGRLETSMRKRR
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactggtatgttggccatccccaggactctggaaacactcccagcagcatggag
cagcaaagcggccctggggaggaaatgggagccaaggcgtcgctggtggaggttccggga
gccggctctgcactggttccttctcccactctggagaacatccgagcagcatatgagggc
ggggagggggaggctgccggggagctgatcaaacaagcctgctgcttggagtgcagcgca
gggatgccccagatcaacggggtgcgtctcctgtgtgaggccagtcagcatggggatctg
cagagtgtgtgttacctcctgaaagaagcccgtatcactgttccccaggagccatccgac
agcaacccggccatcctggcagcatactacggccacgccagcctggtcaaagagctgctg
gactctatacctggtccatgtctgaggagagacttgctgaactggatgctggccacctct
tgccaggagggacacctggacgtggtccggctgctggtccacggctacgacgctgatgcc
aaggactgtgccatccacagcgatgagtttgctgtcatcactgggctgccactgtacgct
gctgcacgagcaggtaatgaggatgtagctcacttcctgctgcagaacggagcaggattc
tcctcatacaccctgatggaccatccggccttcagcaaacacctcctcagactcaaacta
caggaaacctccaacgcagaaggagaggaggctgtcactgtgtgctggagaggtctgcag
ctgccctggttggagctggactggttcatggacgtctcctcacggatcacccacctggat
ctgtcgtccaacagcctggctgccctgccctccgtggtgccttggggtctcatccacctg
cagactctagacctttctaacaacctgttcaaagagcttccagctgctgacaactcccag
gaggtcatctgctcaagtttgcagcagatcaatctctctcagaaccagctcaccagtctg
ccacccggacttctccacctgaccaacatccagagactttctgctgcaaagaaccagctc
agagtcctgtttgacatcccctccactactaactggatcggccttcgtaagctggaggag
ctggatgtgtctgataactgtctcaccagtctgcccacggccgtcatgcactgtttgaaa
tccctgagcctcctcaacgtgtgcaggaacacactgagcagcttccctgacccctgggct
tgtccactgaaacaatgcaaagcttcctccaatgtgatcgagagacttccaaacaccatc
tccatcttctggaggactcagctgcaggaggtggacttctctgacaacagcctgaaggag
ctgccttcatatatttttgaactggaggccctagtcttgttgaaattgtgtgggaatcac
atcgcaacactcccagcccccagtaagtggaagtgctctcaactcaggaccctcgatctt
tccaggaaccagctgggcaaaacagaggaggggcctaaatccaggaggctggccttcttg
actacatggagcaggagggacccggatccagacccagtgtgtcccatagagtttcccatg
attctccgcgattctctggaagtgcttttcttgaatgacaaccagctggagtgtgttccc
cattcagtgtgtggtctgcacagcctcactgagctctacctctccaataatcctggaatc
cgggagcttccagcagagctcagtcagctctccaacctgtggcagctggacattgaagac
ctcaacattactaatgtcccccaggatgtaagaaaagaaggtcctacgtccgtcctggct
ttcctccgggcgcacctccgaaaggcagagccgttcaagctgctgaagatgcttgtgatt
ggtcctccgagacaggggaagacggcccttgtggaggctctacagaccggcaggccggcc
cccttcaccccagcagaatgcagcatctccacctccaactgggagctggacaaaaccagc
ggaaacaaaaacagcaaggactcggtggcgttcaacgtgtgggacatcggcggtcaagcg
agcatgtccacggtgaaccagtgtttcttcactgataaggccctgtacgtggtgatctgg
aacctggctctgggagaggaggctgtggccaacctgcagacatggctgctcaacatagag
gcgcgagcacccaactctgccgtggtggttgtgggaacgcatttggatctcattgacacc
aagtttcgcactgaaagactggccacgctgagagcttatgttctggctctgtgccgatcc
ccgtcaggggctcgagccaccggctacccggacatcacctggaaacacctgcatgaagtg
tcctgtaagaccctggagggcttggatgtgctgaagaagctgatctaccaggtggctctc
tccatgaaagacagcagccgctcagcctgtggcagtaaactactgggcagactgatcccc
aggagctacctgacactccaggaagcggttatagcagagaagcaaaggcgagatgctgag
ggggaggtccagtacctaactgatgaccagctggaccgcatcatagaacagaacccagga
agtgacatcagagactatgaggacctgcagaccgccatcagcttcttgattgagacgggg
accctgctgcacttccccgacaccagccatggcctttgtaccctctacttcctgtgtcct
gtgtggctgtcagaatgtctggagaggatcatgcacctcaagtcctctcgctctgtagcc
aggaatggagtgatccgcgcagaagaccttaggatgctactggtaggaaccgggttcacc
gagcagacagaggaacagtatttccagtttctcgccaagtttgagatcgctcttcctgtg
gccagtaacagctatctgctgccccatctccttcccccgaaaccagccatggacatccac
ggcttccgtcagcagaccaacaacaccctgcagcgccttgtccagatgagctttgttcct
gccggattctgggagcgtttaattgccaggatgctcatcagcctcacaatgatggacctg
cagtcatttgagcccaaaagaaacaccaggagccagcacagcaggaactcggtgatctac
agctttactggaacccagcagaggaaccgttgcagcaccttcagagtccgacgcagccag
accatatactggaaggaggggctgctggccacttttgatggaggttacctcagcgtggag
tcatcagatgtcaactggaagaggaagaagagtggaggcataaagatcatctgccagtca
gagacgagagatttctctgccatggccttcatcacagacaacgtcaactctctgattgag
caatggttccctgctttgacagccagtgagagtgatgggagtctcctcatagagcagtac
gccccctgtcccctctgcgcctcactgggccaacagcgggccgagctcgtggccagcctg
gtgggccaggtcggagagaaagcagcagcagcagcagcagcagcagcaggtggaggagat
ggggttcattactttaacatggaggactgtgtgctggctgctgtggagaaggagcacatc
atttgtcctcagcaccccgaccagcccgtcaccctccaggagctggtcccagagctcttc
atgaccgacttccctgcacggctgtttttagacacggcccagctggagtactctgaggag
gagagtaacatccttggtcagggtggcagtgggactatcatctacagagcccgatatcgt
aaccagccggtggccatcaaacgcttccactttaagaagtgtcgacagcagaccatcagc
agtgacacagacaccatggtgaaacacctgcagtctgcaaatgcctgtcggagcttctca
gagtttcgccaggaggccagtatgttgcactctctgcagcatccctgcatcgtctctctg
gtgggcatcagcatccacccgctctgcttcgccctgcagttggctccactgggcagcctc
aacacggtgctggaggagaagaacaaaggcaaaggctccaggtacatgccccttggtcac
atgctaactttcagagtagcctatcagatcgcggcaggacttgcgtaccttcacaagaag
agcatcatcttctgtgacctcaaatctgacaacatcctggtgtggtctctggaggtgcgg
gatccaattaacattaaactgtctgactatggcatttctcgacaaaccttccatgagggg
gcgttgggggtggagggcacaccaggttaccaggctcctgagatccgaccaggcatcgtg
tacgatgagaaggtggacatgttctcctatggtatggtgctgtatgagctgctgtctggg
cggaggccagcgctgggtcaacaccagcttcagatagcaaagaagctctccaaaggcatc
cggccagcgctgggcagtccagaggaggttcagttctactgcctccacagcctgctgact
gaatgctgggacaccaagcctgagaagaggccggtggccatgcagtgtgtgaggcagatg
cagcagcccagcttcccctgcctcaggtatctgttgtcctgtgacagccaatcgcagctc
ttcctgtcccagctgcagggacacagcgctgtgttctggaacggagacaaggacgacagg
aactacagtgtggtgaatgtggagaagggccaggtggaggtgaagaggatgtcctgtgcc
ggcagcaggatcagctgtcagatgaagatgggtaacattctgtggacggccactgaggag
caggaggttttcatctacagtctgaaggacatgtgtcctctcagtcaaccccagaaacag
ttctcctgtccagccatcatcacctgtctgttccctgtcccagcaagagaacagagcctg
gccagagtgtttgcgggaatgtctgatggcctggtggcggtgtacagcttagtggaggac
cttcctctggacggggagacctacctgtgttcacacaccctcaacaagacggtgtttgct
ctgaaggactcagatcccaggcagagaccctacccggtcaggagcatggcacttgtcagc
agtggctcccagttatggttctccaatggtccgggcgtgctggtcattgactgtctgagt
cttcaggcagttcggaggctggagccctacaacccgccgtcctccatcgtatccatgaca
accagcttcagtctgtggggagaggaggcggtctggactcttgacgaccacatgaacacg
ctgcttctctaccacgctgcctcctaccagctctgtgccaagtactgctgcggagacagc
agtcctcttcgggatgtcttcgctgtggagcgtcctgcaggggttaccatgtcgacaacc
actgaactcaagaccacggagcaagaagagaagctggactggaataacggagaagtgaca
ttgatctacagcgaggaggcgggcactcagatcatccagcaccaggactcccagacagac
tactgctccatatcatccagctgctccctagagccgctggggcccgactgttccagcacc
gcaagcctggcctccatagccagccacagcagtgtgccaccgcctacagagccggaggat
acgggcagggaccaggaccagcaggattcaaccaaacctgagtctgatccagacactgca
gagaccgtgagccccacaccgcctcagctgcaagccttcactgtgctgccagtgaacgga
acgctgtggatccccaggcgtggaggtgacatgatggtcattgaaatgcagtcacacggc
aatcagctgagggggcgtgtcaccgctgtcctcagtccaccaggatgttcctctttgggg
atcctggaggaggcagcacttgtggcaaaggacacagttgtatgtggctttcataaggaa
aacatggagtggtgcctgtgtgtctggaggggctggggctgccgcgagctggaagtcttc
taccagtcttatgaggagcttggccgcttggagaccagcatgaggaaaagaaggtag
DBGET
integrated database retrieval system
