Anoplopoma fimbria (sablefish): 129106875
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Entry
129106875 CDS
T09102
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129106875 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129106875 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129106875 (snw1)
Spliceosome [BR:
afb03041
]
Complex B
Other components
Prp19-related factors
129106875 (snw1)
Complex C
129106875 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
129106875
NCBI-ProteinID:
XP_054474116
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All DBs
Position
18:complement(19369086..19378828)
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AA seq
538 aa
AA seq
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MSLTSFLPAPTQLSQDQLEAEEKLRAQKSYSTALVSSRKEPPPYEHRKGWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDSIARQGQGKDKVIFSKYTDLL
PKEVLNEDTPELQKPDEEAIKELTEKTRSALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVLHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKAAGGEDSEVRDRDEIR
HDRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGVPNPRSASEAQYDQRLFNQSK
GMDSGFAGGEDETYNVYDQPFRGSRDMASNIYRPSKNIDKDAYTDDFDTLMHNNRFVPDK
EFSGADHGQRREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSSRSKDDYHDKKRRKE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagctttttaccggcgccgacccagctttctcaggaccagctggaggca
gaggagaagcttcgggcccagaagtcctattccaccgccctggtgtcgtcccgcaaggag
ccccctccttatgaacacagaaaaggctgggtgcctcgctcccttgaggactttggagat
gggggagcttttccagagatccatgttgcccagtttcctctggagatgggcaggaagaag
aagacatccaatgccctggctgtacaggtggatgcagaaggaaagatcaaatatgactcc
attgccagacaaggacagggcaaagataaggtgatcttcagtaagtacacagaccttcta
ccaaaggaagttcttaatgaagacactccagaactacagaagcctgatgaggaggctata
aaagagctgacggagaagacccgcagtgccctggacaagcaggtgtctcaaaagattgct
gctgccatgcctgtaagagctgcagacaaacaagctcctgcccagtacatcagatacacc
ccatcacagcagggagtggctttcaactcaggggccaaacagagggtgatccgcatggtg
gaaatgcagaaagatccgatggaacctccacgttttaagatcaacaagaagattcctcga
ggacctccttctccccccgcccctgtcctgcattccccaagcagaaagatgacagtcaag
gagcagcaggaatggaagattcctccatgcatctccaactggaaaaacgccaagggctac
accattcctcttgacaaacgtctggctgctgatggtagagggctgcaaaccgttcacatc
aatgaaaactttgctaagctggccgaggcgctctacatcgccgacagaaaggccagagag
gcagtggagatgagagcccaggtagagaagaagatggcccagaaagagaaggaaaagaag
gaggaaaaactgagggagctggcacaaatggccagagaccgcagggcagggatcaaaagt
catggggacaaagcagcaggtggcgaggacagcgaggtcagggaccgtgacgagatccgc
catgacagaaggaaagagagacagcacgacaggaacatttccagggctgctcctgataag
aggtcgaagctgcagagagaccaagacagggacatcagcgagctcatcgctctgggcgtt
cccaacccacgttctgccagtgaggcccagtacgaccagcggctctttaaccagagcaag
ggtatggatagtggttttgccggtggtgaagatgagacctacaacgtgtacgaccagccg
ttccgtggcagcagagacatggcctctaacatctaccggcccagcaagaatatagacaag
gacgcctacacggatgactttgacacactcatgcacaacaacaggtttgttccagacaaa
gagttctcaggtgccgaccacgggcagaggcgggaagggccagtccagtttgaggaggat
ccattcggtctggacaagttcttggaggaggccaagcagcacggcggctccaagagaccg
tctaccagcagccgctcaaaggacgactaccacgacaagaaacgcaggaaggagtga
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