Anoplopoma fimbria (sablefish): 129106892
Help
Entry
129106892 CDS
T09102
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
afb01100
Metabolic pathways
Module
afb_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
129106892 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129106892 (chsy1)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
129106892 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
129106892 (chsy1)
Glycosyltransferases [BR:
afb01003
]
Glycan extension
O-Glycan
129106892 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
129106892
NCBI-ProteinID:
XP_054474142
LinkDB
All DBs
Position
2:complement(32538365..32579593)
Genome browser
AA seq
799 aa
AA seq
DB search
MAGRSRRAWFSVLLGLVVGFTLASRLILPRATELKKAGHKRKASPAGCSLTGAHRAEYGA
ALWPSQEDGSPATEKPGSGSNNFLFVGVMTAQKYLNSRAVAAHRTWAQTIPGRVEFFSSE
GSDTSIPIPIVALRNVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKSEKLEG
FLRSLNSSEATFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLKRMVPHIRECL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKNPPYQYRLHSYMLSRKIADLRHRTIQLHREIVQMGRYGANEPSREDLQLGVPPSFM
RFHPRQREEVLEWEFLTGKYLFSSSDGQPPRRGMDSSQRQALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPLYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFR
EEGEMDARALASHINKDSDSLSFLSNSLKMLVPFKLATSGQEQREPKEKKVNILVPLSGR
YDIFVRFMANFERVCLIPNQNVKLLILLFSTDNNTERVKQVELMREYHMKYPRAEMEIKP
VTGSFSRALALEVGSLHFSNDSLLFYCDVDLLFTSDFLKRCRTNTALGEQTYFPIIFSQY
DPKVVYAGKVPSNNHYVFTAKTGLWRNYGFGIVCVYKGDLVRAGGFDTSIQGWGLEDVDL
FNKFVQSGLKLFRSTDTGIVHVHHPVICDPNLEAKQYKMCLGSKASSHGSTQQLAELWLE
KNDHGFRRLASNNGSVRTA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaagcagaagagcctggtttagtgttctgctggggctggtggtcggcttc
accctggcgtccagactcatcctcccccgggccacggagctgaagaaagccgggcacaag
aggaaggcgagcccggccggctgctcgctgaccggggctcacagagcggagtacggagca
gcgctgtggccgtcgcaggaggacgggtcgccggccaccgagaagcctggctccggctcc
aacaacttcctgttcgtgggtgtcatgacggcacagaagtacctgaacagcagagccgtg
gcggcacacaggacatgggcacagaccattccaggtcgcgtggagttcttctccagtgag
ggctccgacacctccatacccattcccatagtggccctgagaaatgtggacgactcgtac
ccaccgcagaaaaagtccttcatgatgctcaagtacatgcacgaccattacctggacaag
tacgagtggttcatgagggccgacgacgacgtctacatcaagagcgagaagctggagggc
ttcctgcgcagcctcaacagcagcgaggccaccttcctgggccaaacgggcatgggagcc
cgggacgagctggggaaactggccctggagcccggagagaacttctgcatgggggggcca
ggggtcatcatgagccgcgaggtcctcaagaggatggtgccccacatccgagagtgtctt
caggagatgtacaccacccacgaggacgtggaggtgggccgatgtgtccggaggtttgcc
ggggtccagtgcgtctggtcctatgagatgcagcagctcttctatgagaactatgaacca
aataagaagggctacatacgagacctccacaacagcaagatccatcgagccatcaccctc
caccccaacaagaaccctccttaccagtatcgcctgcacagctacatgctcagccggaag
atcgcagacctacgccaccggaccattcagctccaccgggagatcgttcagatgggacgc
tacggcgccaatgagcccagccgagaggacctccagctcggcgtgccgccttcgtttatg
cgcttccacccgcggcagagagaggaagtcctggagtgggagttcctgacagggaagtac
ctgttctcgtcctctgacggtcagccgccacgccgcgggatggactcctcccaaaggcaa
gccctggatgacatcatcatgcaagtgatggagatgatcaacgccaatgccaagacacga
gggagggtcatcgacttcaaagaaatccagtatggctaccggagagtcaatccgttatac
ggggcagagtatgtgctggatctgctgctgctgtacaagaagcacaaaggaaagaccatg
accgttcctgtgaggaggcacgcctacctgcagcagaccttcagccagatccagttcaga
gaggagggagagatggacgccagagctctggccagccatatcaacaaggattccgactcc
ctctcgtttctgtccaactccctgaagatgctggtgcccttcaagctggccacctcaggc
caggagcagagggaacccaaagagaagaaagtcaacatcttggtccctctgtcgggacgc
tacgacatcttcgtgcgtttcatggcgaacttcgaacgagtttgtctgatcccgaaccag
aacgtcaagctgctgatcctgctcttcagcacggacaacaacacggagcgggtcaagcag
gtggagctgatgagggagtaccacatgaagtatccccgggccgagatggagataaagccc
gtcaccggctccttctccagggctctggctttggaagtgggctccttgcacttctccaac
gattcgctgctcttctactgcgatgtggacctgctcttcaccagcgacttcctgaagcga
tgtcggaccaacacggccctcggggagcaaacctacttccccattatcttcagccagtat
gaccccaaagtggtgtacgctgggaaggtccctagcaacaaccactacgtctttaccgcc
aagacaggcctgtggaggaactacggctttggcatcgtctgcgtctacaagggggacttg
gttcgagctggagggtttgatacctcgatacaggggtggggactggaggacgtggacctt
tttaataaatttgtccagtcggggcttaagttgttcagaagcacagacacggggatagtg
cacgttcaccaccccgtcatatgtgacccgaacctggaggcgaagcaatataagatgtgt
ctgggctccaaggcctcgtcgcacggctccacccagcagctggccgagctctggctggag
aagaacgaccacggcttcaggagactggccagcaataacggctcagttaggacagcgtga
DBGET
integrated database retrieval system
