Anoplopoma fimbria (sablefish): 129106957
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Entry
129106957 CDS
T09102
Symbol
jag2b
Name
(RefSeq) protein jagged-2b isoform X1
KO
K21635
jagged-2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129106957 (jag2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_2
DSL
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_CA
Herpes_UL32
EGF_3
cEGF
V_ATPase_I
SID-1_RNA_chan
DUF6479
DUF6377
DivIC
Motif
Other DBs
NCBI-GeneID:
129106957
NCBI-ProteinID:
XP_054474226
LinkDB
All DBs
Position
18:14957646..15001861
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AA seq
1265 aa
AA seq
DB search
MWNRTRIRNCFPIVCLLLTLWTEVSQSTGYFELQLITVENVNGELADGECCDGSSRDSDL
RCTRDECDTYFNICLKEFQTQVVTTSSGTCTFGAAATQVLGGNMFSFKSAKNNANKIDEA
GKILIPFQFAWPRMYTLIVEARDWDNSTRNNEEELLIERSIRTGMINPGDQWQTILHDGP
VARLIYRIRVRCDDNYYSNKCNKLCVPRDDYFGHYRCETSGAQVCLDGWMGSDCRTAICK
QGCNLLHGGCSVPGECKCNYGWRGQFCDECRLYPGCVHGTCNIQWQCNCERNWGGLLCDK
DLNYCGRHHPCVNGGTCMNTEPDEYHCACPRGYSGKTCQIAEHACVSNPCANGGTCHEVP
TGFECLCPPGWEGPTCADNLDECASSPCAQGGTCVDLEDGFECVCPPQWEGKTCQIDANE
CAGNPCVNAYSCKNLIGGYHCDCFPGWSGQNCDIKLNGCHGQCQNGATCKENLSGHHCQC
LPGFVGSHCEIQRNKCDSRPCQNGGQCHTVLDGFVCQCPPQFAGQLCEIYGWSPSDACDP
NPCENEAKCHSMEQDFYCACPEGFEGKTCERLKENCQTAPCQVIDSCTVAIATNDSAGVR
HISSNVCGPRGRCNSQPEGNFTCMCDPGFSGIYCHENINDCINNPCGNGGTCIDGVNSFQ
CFCPDGWEGRLCDLNVNECRHNPCKNGGRCVDLVNDFYCECADNWKGKTCHSRENQCDAT
TCGNGGTCYDHGDTFRCACPPGWGGNACNTARNSTCASSPCSNGGTCVGGGDTFTCICKE
GWEGPTCDQNINDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRININECQSSPCAYG
ATCVDEINGFRCICPLGRTGARCQEFIGIGRTCHYAGLQFPHGSRWEEECNSCHCINGKM
DCTKVLCGRRPCRLQSSDQDQKQQSCPAGRECLEHSYLTCFSPPCYQWGVCSKAGPSAPQ
ATTKCQPNTGHLDNSCGRITLVFNRDKVPTGTTVENICYELRSLPDTRSLARDHALLLLC
DLSHSNQDAVEVAISFQPEDLPDHSLIQEVASAIVGTLSKRHNSTVMLAVIEVKVETQVM
PPSVADYQVPLLCVVFCLLCLFCIIVCVWWTRKRRKERERNSRPVSDDNVNNQWQPLRIV
VGRQQQQQQQQQLKESNRDAEQERKKLMGPSYRTSDEEEEEEEEETEGELELDEECGGAE
AGKQSVYMYSKTAVQSSGGVICTMHSSSSPLKAPHRTPGYSPKDNRWKNVSAVLTGQKDL
RDHCV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcgcaccaggattaggaattgcttcccaatagtgtgcctgctgttgacgtta
tggacggaggtgtcccagtcgaccggctatttcgagctgcagctgatcacggtggagaat
gtaaacggcgagctggcggacggggagtgctgcgacggctccagcagggactccgacctg
cgctgtacccgagacgagtgcgacacttacttcaatatctgcctgaaagagttccagacg
caggtcgtcaccaccagcagcggcacctgcaccttcggagctgcagctacgcaagttctc
ggtggaaatatgttttcttttaagagcgcaaagaataacgcgaataaaatcgacgaggct
ggcaagattttgatcccgttccagtttgcgtggccgcggatgtacacgttgattgtagag
gcccgggactgggacaacagcacacgcaacaatgaggaggagctgctgatcgaacgcagc
attcgcaccggtatgatcaaccccggcgaccaatggcagaccatcctgcacgacgggccc
gtagctcgcctcatataccgcatccgggtgcggtgcgatgacaactactatagcaacaag
tgcaacaagctgtgcgttcctcgggacgactactttggccactatcgctgcgaaacttca
ggggcccaggtgtgcctggatggctggatgggctcagactgcaggacagcgatctgcaag
caaggctgcaacctgttacacggcggctgctctgtcccaggggaatgcaagtgtaactac
ggctggcggggccagttctgtgatgaatgtaggctttaccccggatgtgtccacgggacc
tgcaacatccagtggcagtgcaactgtgagaggaactggggtggcctgctgtgtgacaaa
gatctgaattactgcggtcgtcaccatccttgtgtaaatggaggaacctgtatgaacact
gaaccagatgagtaccactgcgcctgtcctcggggatactctggcaagacctgtcagata
gccgagcacgcctgtgtttccaacccttgcgccaacggtggtacctgccacgaggtcccg
acaggtttcgagtgcctgtgtccaccgggctgggagggtccgacctgtgccgacaatttg
gatgagtgtgcctccagtccatgtgctcagggtggaacctgtgtcgaccttgaggacggc
tttgagtgtgtgtgccctccacagtgggagggaaagacctgccagatagatgcaaatgag
tgtgcaggaaatccctgtgtgaacgcttactcttgcaaaaatttgattggcggatatcac
tgcgactgttttccgggatggtctggacaaaactgtgacatcaaactcaacggctgccat
ggtcagtgccagaatggagcaacatgcaaggagaatctaagcggtcaccactgccagtgt
cttccaggatttgtgggctctcactgtgaaatccagaggaataagtgtgacagcagacca
tgccagaatggcggccaatgccacacagtgttggacggctttgtgtgtcaatgtccacca
cagtttgctggacagctgtgtgagatctatggctggtccccctcagacgcttgtgatccg
aacccttgtgagaatgaggccaagtgccacagcatggagcaggacttctactgcgcatgt
cccgaaggcttcgaggggaagacttgtgaacggctcaaggagaactgccaaaccgctccg
tgtcaagtgattgacagctgcactgttgccatcgcgaccaacgactcagctggagtgcgg
cacatctcctccaacgtttgcggtccacgaggacgctgcaacagccaaccagagggcaac
ttcacctgcatgtgtgatccgggtttcagtggcatctactgtcatgaaaatattaacgac
tgcatcaacaacccctgtggaaacggagggacctgcattgatggagtgaactcctttcag
tgcttctgtcctgacggctgggagggccgactctgcgacctcaatgtcaatgagtgcaga
cacaacccgtgtaaaaatggcggacgctgcgtcgacctggtgaacgacttctactgcgag
tgtgccgacaactggaagggcaagacctgccattcccgcgagaatcagtgtgacgcgacc
acctgcggtaacggaggcacctgctacgaccacggggataccttccgctgtgcctgccca
cctggttggggaggaaacgcatgcaacacagcccggaacagcacatgtgcctccagtcct
tgctccaacggtggaacatgtgtgggaggaggagacaccttcacctgcatctgcaaagag
ggctgggaaggccctacctgtgatcaaaatataaatgactgcaaccctcatccatgttac
aacggcggcatctgtgtggatggagtcaactggtttcggtgcgagtgcgctccgggattc
gccggaccagactgccgaatcaacataaacgagtgccagtcttcaccttgtgcctacggt
gccacctgtgtggacgagatcaacggtttccgctgcatctgtccgcttggtagaacagga
gcccgatgccaagagtttataggtattgggaggacttgccactatgctgggctgcagttt
ccccatggcagccgctgggaggaagagtgcaacagctgccattgcatcaatggcaaaatg
gactgtacaaaggtgctgtgtggtcgccgtccctgtcggctccagtcttcagaccaggac
cagaaacagcagtcctgcccggctggacgagagtgtctggagcacagctacctgacctgc
ttctcccctccttgctatcagtggggggtttgttccaaggctggaccctcagctccacaa
gcaaccaccaagtgccaaccaaacaccgggcatttggacaacagctgtggccgcataaca
cttgtcttcaacagagacaaagtaccaacaggaacaacagtggagaacatctgctatgag
ctgaggtctcttcctgatacccgaagcttggcaagagaccacgcccttctccttttgtgt
gacctctctcattccaatcaagatgctgtagaggtggctatatcttttcaaccggaggat
ctaccagaccacagtctgatccaggaggtagccagtgccattgttggcaccttgtccaag
cggcacaacagtacggtaatgctggccgtcattgaggtcaaagtggaaacacaggtcatg
cccccctcagtagcagactaccaggtgcctcttctatgtgtggtgttctgcttgctctgc
ctcttctgcattatcgtatgtgtttggtggactcgcaaacggagaaaagagcgcgagagg
aactcacgaccagtttcggacgacaatgtgaacaaccagtggcagccactcaggatcgtt
gtggggcgtcagcagcagcagcagcagcagcagcagctgaaagaaagcaacagggacgcc
gagcaggagcgcaaaaagctcatgggcccctcctatcggacgtctgatgaggaggaggag
gaggaggaggaggagacggaaggcgagcttgagctcgatgaggagtgtggtggagcagag
gcgggaaaacagtctgtttatatgtactccaagactgcagtgcagtccagtgggggagtg
atctgtaccatgcacagttccagttcaccccttaaagcaccccaccggaccccaggctac
agccccaaagacaaccgctggaaaaatgtcagtgccgtcttgaccggtcaaaaagacctc
agagaccattgtgtataa
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