Anoplopoma fimbria (sablefish): 129106960
Help
Entry
129106960 CDS
T09102
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03410
Base excision repair
afb04210
Apoptosis
afb04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129106960 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129106960 (parp1)
04217 Necroptosis
129106960 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129106960 (parp1)
03036 Chromosome and associated proteins [BR:
afb03036
]
129106960 (parp1)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129106960 (parp1)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
129106960 (parp1)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129106960 (parp1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
129106960 (parp1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129106960 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
129106960
NCBI-ProteinID:
XP_054474232
LinkDB
All DBs
Position
18:9391029..9402636
Genome browser
AA seq
1014 aa
AA seq
DB search
MADSQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTADISGYSDLRWDDQEKVKKAIESGGAAGGKGDQKGGAKGLKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKSVDPEKPQLGLIDRWYHTACFVSRREELVFKPEYNAAQ
LKGFNSLREEDKGELKKRLPVVKTEGKRKADEVDGASKKQKKEEEDEKKKLDEQLKNQST
LVWGIKDKLKKFCSTNDMKELLIANGQEVPSGESNVVDCLADGMAFGALEACKECKGQVV
FKGDAYYCTGDISAWTKCVFKTTTPTRRDWVIPKEFHEVPFLKKFKCKRQDRVYPKEAPT
QTLTKVKAEPLASASSAPTERLPEGAPADKPLTGMRLITVGKLSKNKDDLKAAVEEMGGK
ITSTANKASLCLSTKKEVEKMSKKMEEARDNGVRVVSEDFLTDVKSSGKALQELVSLHAI
SPWGAEVKVEAPASSVASKSGPLATKSTGRVKEEEAGSKSKKMKLTVKGGAAVDPDSGLE
NSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSALDNFLVVYKEKTGNEWSSSNFTKYPNKFYPLEIDYGQDEEAVKRLTATAG
TKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEVQQAV
SDSQSEAQVLDLSNRFYTLIPHDFGMKKPPLLNSLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNESDPIDINYEKLKTKIEVVDKNTEEAEIITQYVKNTHAATHNTYTLEVQEIFKIV
REGERQRFRPFEELHNRQLLWHGSRTTNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPTGLLLLAEVALGNMHELKKASHITKVPKGKHSVKGLGRTAPDPGA
SVTLDGVQVPLGKGANTNIDDTSLLYNEYIVYDVSQVNMKYLLKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcaggaggacaagctgtacaaagcggagtatgcaaagagcggccgcgca
tcgtgcaagaaatgcaaagagaacatcgctaaagactctctgaggatggccatcatggtg
cagtcccccatgtttgatgggaaagtcccccactggcatcacttctcctgcttctggctg
cgagcagcggctcagtcgactgctgacatttctgggtattctgacctccgctgggacgac
caggagaaggtcaagaaggccattgagagtggcggagcggctggaggaaaaggggaccag
aagggtggagctaaaggactgaagacactgaatgactttgcggttgaatatgcaaagtcc
aaccgcagcacatgcaaaggttgtgatcagaaaatagaaaaggatcagatccgtgtatcc
aagaaatctgtggacccggagaagccccaactgggtctgatcgaccgctggtaccacacg
gcgtgttttgtgagccgcagggaggaactggtcttcaagcctgagtacaacgccgcccag
ctgaagggtttcaactcactgcgggaagaagacaagggggaactgaagaagaggctccct
gttgtcaaaactgaagggaagcgtaaagctgatgaggtggatggagcatcaaagaaacaa
aagaaagaggaagaggatgagaagaagaagctggacgagcagttgaagaaccaaagcacg
ctagtttggggaatcaaggacaagctgaagaagttttgttcaaccaatgatatgaaagag
ctgctgattgcaaatggccaagaggttccctctggagaatcaaatgtggtggactgcctg
gctgatggcatggcttttggtgctctcgaggcctgtaaggagtgcaagggccaggtggtg
ttcaagggcgacgcttattactgcacaggggacatctccgcctggacaaagtgcgtgttc
aaaaccacaacacccacacgcagagactgggtcatccccaaggaattccacgaagttccc
ttcttgaaaaaattcaagtgcaagcgacaggacagagtttacccgaaggaggcccccacc
cagactctcaccaaagtcaaagcagaacccttggcgagtgcgtccagtgccccgaccgag
cgactgccagagggagcccccgcagacaaacctctcactggtatgaggctgataactgtg
ggcaagctgtccaagaacaaggatgatctaaaggctgctgtggaggagatgggcgggaag
attaccagcacggccaataaggcctctctctgcctcagcaccaaaaaggaggtggagaag
atgagtaagaaaatggaggaagccagagacaatggcgtgcgtgtggtctccgaggatttc
ctcacagacgtcaagtcgtcgggtaaagccctccaggaactggtctccctgcacgccatt
tcaccctggggtgcagaggtcaaagtcgaggcaccagcttcgtctgtagcctctaagtcc
ggaccgttggctaccaagagcacaggcagggtgaaggaggaggaagctggtagcaaatcc
aagaagatgaaactcacagtcaaaggaggagctgctgtggatccagattcaggtttggag
aacagcgctcatgtcctggagcagagcgggaagatgtacagtgctacgctgggccttgtg
gacatcgtcagaggaaccaactcctactataaactgcagctgctggaggacgatgtacag
aaacgatactgggtgttcaggtcatggggcagagtgggcaccaccattggaggcaacaag
ctcgacaagtttcacgacaaaaactctgcactggacaacttcctggttgtctacaaagag
aagacgggcaacgaatggagctcctccaacttcaccaaatatcccaataagttctacccc
ctggagatcgactacggacaggatgaagaagcagtgaagaggctgacggccaccgccggc
accaaatccaagctggccaagccggtccaggagctgatcaagatgatctttgatgtagag
agcatgaagaaggccatggtggagtttgagattgacctccagaagatgccccttggaaag
ctgagtaagaggcagatccagagtgcctattctctcctcactgaagtccagcaggctgta
tcagatagtcagtctgaggcccaggtcctggatctctccaatcgcttctacaccctgata
cctcacgacttcggcatgaagaaacctccgctgctcaacagcctggactacatccaagct
aaagttcagatgttggacaacctgttggacattgaggtggcatacagcctgctgagagga
ggggcccaggacaatgagagtgatcccattgacatcaactatgagaaactcaaaaccaag
attgaggttgttgacaagaatacagaagaggctgagatcattacgcaatatgttaagaac
acccacgctgctacacacaacacgtacacacttgaagttcaagagatcttcaaaattgtt
cgagagggagagcgccagcggttccgtcccttcgaggagcttcacaatcgccagctactg
tggcacggttctcgcaccaccaactacgctggtatcatgtctcagggtcttcgcattgcc
cctccagaggccccagtgactggttacatgttcggtaaaggtgtgtactttgccgacatg
gtgtccaagagtgcgaactactgtcacacgtcccagtcggaccctacaggcctcctactg
ctggctgaggttgctctcggcaacatgcatgaattgaagaaggcgtcccacattacaaaa
gtacctaagggcaagcacagtgttaaaggtttgggcagaactgctcctgatccaggtgca
tctgtcactttggacggggtgcaagtgcctctgggaaaaggagccaacaccaacattgat
gacacaagtctcctgtacaacgagtacattgtgtatgatgtgtcccaggtaaacatgaag
tatctcctgaagatcaagtttaactaccagacgtccctgtggtga
DBGET
integrated database retrieval system
