Anoplopoma fimbria (sablefish): 129106965
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Entry
129106965 CDS
T09102
Symbol
brf1b
Name
(RefSeq) LOW QUALITY PROTEIN: BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129106965 (brf1b)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
129106965 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
129106965
NCBI-ProteinID:
XP_054474243
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All DBs
Position
18:127108..155631
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AA seq
704 aa
AA seq
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MSSRVCRTCGGSDIDVDQARGSAVCTSCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTSVGKESRAQTLQGGKRQIQQLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGMQTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRTVKDVISVVKVCQTTLRKRLTEFEDTPTSQLTIDEFMKVDLEQECDPPSFTAGQHK
VKMQQLEHELARKLDEVEGEISCYKDEIETELEKSRPKLRGIYAAYTKEIDPDDVEVSSL
TSEPEVPEVEDADLQAAAQHLTQNFLCEVIQEEEGQEKKMDDSEQEEESDKKGEGPHRQV
APLAVILGKLPNAASLSLQQTFQTFTGSEPEDEQSESGELDLKDIDDQEIDKYILNDREV
QVKTELWMKQNAEYLREQKEKEERIRKEKEQGTYKEKPKKSKKKKEQIPASTAGEAIERM
LEKKKISSKINYDVLRDLNSRGTGSXGGSSPSPASSDXPDIAAATRRRLNRRRRRKTSDA
NRDLAATTGIMGKRVRLLLSSTSKKKKVAVQAENTVTMTTDATTEASSEGTPGPEADSSS
TPAAPAPVVEEEEEEEEVEVEEECVSALQLVGDYGCDAEEEEVF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgcaggacctgtggggggtccgacatagacgtggatcaggcccgg
ggcagcgcggtgtgtaccagctgtggttcggttctggaggacaacatcatcgtctccgag
gttcagttcgtggagggaagtggaggagtttcttctgctgtgggacagtttgtctctgct
gacggtccagttaaggctccccttcttggttctggttttcacaccagtgttggaaaagag
tccagggcccagaccctgcagggcggtaagcgtcagatccaacagctgggcagtcagctt
cagctgaaccagcactgtttggacacggccttcaacttcttcaagatggtcgtcagtaaa
catctgacgcgaggacgcaagacggagcacgtcatcgccgcgtgcctctacctggtgtgt
cgcaccgaggggacgccacacatgttgctggacctgagtgacctgctgcaggtgaacgtt
tacattctggggaaaacctttctgctgttggctcgtgagctctgcatcaacgctccggcc
atcgacccttgcctttacatccctcgttttgctcacatgttggagtttgggatgcagact
catgaggtttccatgacggctcttcgtctggtccagaggatgaagagggactggatgcac
acaggacgccggccgtccggactctgtggagcagctctcctggtggcagctcggatgcat
aagtttcgtcgtacggtgaaggatgtgatcagtgttgtgaaggtctgccagaccactctg
aggaagagattaacagagtttgaggacacgcccaccagtcagctcaccatcgatgagttc
atgaaagtagatctggagcaggaatgtgatccaccctccttcaccgccggacagcacaaa
gtcaagatgcaacagctggaacacgagctggccaggaagctggatgaggtcgaaggagag
atcagctgctacaaagacgagattgagacagagctggaaaagagccgacctaaactgaga
ggaatctacgccgcctacaccaaagaaatcgaccctgatgacgtcgaggtctcctccctc
acctctgaacctgaggtgccggaggtcgaagacgccgatctccaagccgccgctcaacac
ctgacccagaacttcctgtgtgaggtgatccaggaggaggaggggcaggaaaaaaagatg
gatgacagtgagcaggaggaggagtcagacaagaaaggggaggggcctcaccgtcaggtt
gctcctctggccgtcatcctgggaaaactgccgaatgcagccagcctgagcctccaacag
accttccagaccttcactgggtcggaaccagaagacgagcagtcggagagtggagaattg
gacctgaaggatatcgatgatcaggagattgataagtatatcctgaacgatcgggaggtc
caggtgaagacggagctgtggatgaagcagaacgcagaatacctgagagagcagaaagag
aaagaagagcggattaggaaagagaaggaacaggggacgtataaagagaagccgaagaag
tccaagaagaagaaggagcagatcccggcgtcgacggcgggcgaggccattgagaggatg
ctagagaagaaaaagatctccagtaagatcaactacgacgtcctcagggacctgaacagc
agagggactggaagtnnggggggcagcagtcccagtccagcgtcctccgacnnccccgac
atcgctgccgctacacggagacgactcaaccgccgccgccgcaggaagaccagcgatgct
aacagagacctcgctgctaccactggcatcatggggaagagggtccgactccttttgtcc
tccacatcaaagaagaagaaagtagccgtacaggcagaaaacactgtcaccatgacaaca
gatgcaacaacagaggcttcatctgaagggactcctggccctgaagcagacagcagctcc
acccctgctgccccagcccctgtggtggaggaggaggaggaggaagaggaggtggaggtg
gaggaggagtgtgtcagcgctctgcagcttgtaggggattacggctgtgatgcagaggag
gaggaagtcttctag
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