Anoplopoma fimbria (sablefish): 129107110
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Entry
129107110 CDS
T09102
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b
KO
K12822
RNA-binding protein 25
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129107110 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129107110 (rbm25b)
Spliceosome [BR:
afb03041
]
Complex A
U1 snRNP components
U1 related factors
129107110 (rbm25b)
Complex B
129107110 (rbm25b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
129107110
NCBI-ProteinID:
XP_054474461
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Position
18:12883986..12894940
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AA seq
804 aa
AA seq
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MSFPPHLNRPLLPPPGMPHQFAGFPSGTPMIPVHVGIMTPTSAVMMPSMHVISKPAIHKK
EILRVKDNNENSGPTTTVFVGNISEKASDMLIRQLLAKCGIVLSWKRVQGASGKLQAFGF
CEYKEPESTLRALRLLHDLPIGEKNLLVKVDAKTKAQLEEWKAKKKTTNGNKKAEDGDDD
EEVLDEETKKKDQIIKGAIDGLMREYAAELNAPSQDEDSQRRKRKREKKEEDDINTIDME
DDKRDLISREISKFRDTHKKLEEEKDKREKERLEFERERRDREKERERERERRDREREKE
RERERERASDRDKDRDRRTRERERERDWERDRSRDRTPEPSRSREVSRDRDREKKRDQED
EEEAYERRKLERKLRDKEAAYQERLKNWELRERKKARDYAKEAEREDERRREMMKEGKRL
KEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLDEGHP
NPDAELRRMEEEEEERLRQPPIVQEPEPEEERERHRGSRDHRDRRQEQERAEPRSRLAHL
DDEVEEGEEDVYDNDEDNPDTKPCLKPTMRPITAAPSVSSASGGASPNTPGDESPCGIII
PHENSPPEALPQEEHRPKIGLSLKLGASGSPSQPNVGKRKKLPVDSVFDKFDDEETDEQP
RKRKLVPLDYDDDKSLEVDGAGGLSSIKGANTEEKRKHIKSLIEKIPTAKPELFQYPLDW
SMVDTTLMERRVRPWINKKIIEYIGEEEATLVDFVCTKVMAHSMPQSILDDVAMVLDEEA
EVFIVKMWRLLIYETEAKKIGLGK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcccccctcatttaaaccggccgttgttgccacctcccgggatgccccatcag
tttgctggcttcccctcaggaactccaatgatcccagttcatgtcggcatcatgaccccc
acctctgcagtgatgatgccttctatgcatgtgatcagtaagcctgcaattcataaaaag
gaaatattgagagtcaaagacaacaatgagaacagcggccccaccaccacagtgtttgtg
gggaacatatcagagaaagcttcagacatgctgatcagacagctgctcgcgaaatgcgga
attgttcttagttggaagagagtccaaggagcctctggcaaacttcaagcctttgggttt
tgtgagtacaaggagccagagtccacattgcgagcactgcggctgcttcatgacctgccg
attggagaaaaaaatttgttggtgaaggtggatgccaagactaaagctcagctggaggag
tggaaggccaaaaaaaagaccacgaatgggaataagaaggctgaagatggagatgatgat
gaagaggttttagatgaggaaacaaagaagaaggatcagattattaaaggtgctatcgat
ggattgatgagggaatatgcagcagaactcaacgcgccttcacaggatgaagactctcag
cgacgaaagaggaaaagggagaaaaaagaagaggatgacattaacactattgatatggag
gacgacaagagagacctgatttccagagaaattagtaaatttcgagacactcacaagaaa
ctagaagaagagaaggacaaaagggagaaggagcggctggagttcgagcgggaacggagg
gatcgggaaaaagaacgagagcgggaaagagagcgacgggaccgcgagagggagaaggag
cgtgagagggaaagagagcgggcgagtgaccgagacaaagaccgcgaccgcaggaccaga
gaaagagagcgagaaagagactgggagcgagaccgaagccgcgacaggaccccagaaccc
agccgatccagggaggtcagtcgagaccgagacagggaaaagaaacgagaccaagaagat
gaagaggaagcgtatgaacgcagaaagctggaaaggaaactcagggacaaggaagcagcc
tatcaggagcgtctaaaaaactgggagctaagggagagaaagaaggcacgggattacgcc
aaggaggccgagagggaagatgaacgcagacgggaaatgatgaaagagggcaaacggttg
aaagagtttcttgaagactatgatgatgacagagatgaccccaagtactataggggcagt
gcgctgcagaagcggctcagagaccgagaaaaggagatggaggcagacgagcgtgacagg
aagagggagaaggaggagctggaggagatcagacagaggctgttagacgagggacatcca
aacccagacgcagagctacgcaggatggaggaggaagaggaggagcgtctgagacaacct
cccatcgttcaagagccggagcccgaggaggaacgggaacgccacaggggttcaagagac
caccgggaccggagacaggaacaggaaagagcagaacctcgatcacggctcgcccactta
gatgacgaggtggaggagggtgaggaagatgtttatgacaatgatgaagataaccccgac
acaaaaccttgcttgaagcccacaatgcggccaatcacagcagcaccgtcagtgtcgtcg
gctagtggcggcgcgtcccccaacacacccggggacgagtcgccctgcggcatcatcatc
ccccacgagaactcaccccctgaggccctgccgcaggaggaacaccggccaaagattggc
ctcagtctcaaactgggtgcctcaggaagccccagtcaacccaacgtaggtaagaggaag
aagctgcctgtggacagcgtcttcgacaagtttgatgacgaagagactgacgaacagcct
cgcaagcggaagctggtgcccctggattacgacgatgacaagagcctcgaggtggatggg
gccgggggcctctccagcataaagggggccaacacagaagagaaacgtaaacacatcaag
agcctgatagaaaaaattcccacagcaaagcctgagttgtttcaatacccgctggactgg
tctatggtggacacgacgttaatggaacgacgcgttcggccctggatcaacaaaaagatc
attgagtacattggagaggaagaggcgacgttggtggacttcgtctgcacaaaggtgatg
gctcacagtatgccacagagtatcttggatgatgttgccatggttcttgatgaagaagct
gaagtcttcatagtgaagatgtggaggttactcatttatgaaaccgaagctaagaagatt
ggactggggaaataa
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