Anoplopoma fimbria (sablefish): 129107155
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Entry
129107155 CDS
T09102
Symbol
si:dkey-119f1.1
Name
(RefSeq) structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129107155 (si:dkey-119f1.1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
129107155 (si:dkey-119f1.1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
Laminin_II
AAA_21
AAA_29
NPV_P10
GCD14
DUF1664
Fez1
AAA_13
Motif
Other DBs
NCBI-GeneID:
129107155
NCBI-ProteinID:
XP_054474531
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Position
18:9668856..9681320
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AA seq
1089 aa
AA seq
DB search
MSKRKSSAVGDNPNKRVRPAAEEDVEDEDSDQEEPAQNGQVQCAGEVVSDAGIVESITLK
NFMCHSLLGPFTFGSNVNFVVGNNGSGKSAILTALIVALGGNAHATNRGLSLKGFVKEGE
SSADVSITLRNKGRDAYKPEVYGTAIIVDLRITREGLRTYKLRSKSGQIVSTKKEELLYI
LDNFNIQVNNPVSVLTQEMSKYFLHSKGEGDKYKFFMKATQLDQMREDFVYIKTTKHVTE
DKVEQHSECLKDLKRKYLEKEDRYKSMASLDEMHTKLEELQKQMAWALVIEMEKELEPIK
EKLQSDRHSTEKYDEKVDEWKNKVEEAERKSRQIQEKLEGITQQVQELQPKCAELKTEAQ
RRNTLLKSSEVTVHRFKANLRDLEKDKVQLSSRINDLKLSISQTSGAESQARTERTGRIQ
AELENMGHHISTLSQQIDQYQHVCNGAKEEQVKIRRELEVLQRSIEAKRRNLQTMESSRS
NRLRRFGEHMPALLNAIQEAHRKGQLKHKPRGPLGYHISLKDPELALSVEVCLKGQLQAF
TCDNHDDEKVLQGLMSKVFPTGRRPAIITSSFLSVVHDTRRRGVNHPEYPSVLQALEIED
PVVANCLIDQRGIESILLIKNRTDARRVMQSRNPPQNCTQAFSKEGDQIFNNRNYTAEQT
RANYLSGDVEEEIRHLQEEIENQKAQASRYQEQMKKLDDHIKQNEGLLRRTQVEQKTTKD
KATKLQLELTDLQNMEEPQSEDLNPLEEDLQEIVSKISSKRAEYDEARAQMADLKASYEK
AEQEYKQHKEQINTFAEEADPVKEELSKADQDVMKCKHHKKHYDEKRSAHLRNIQTFEAN
QQSKEQDLQASVAKATKICPERLEVRRTARSLDSEINRLKVKITTQQEQQGDREEVVRQY
HEALENYKNMAQQVKYLNSFIKSLDSVMNHRLQVYAQLRRFLSARCKYYFDSMLAQRGYT
GSMAFDHKNETLSISVQPGQGNKADLSDMRSLSGGERSFSTVCFVLSLWAITEAPFRCLD
EFDVYMDMVNRRISMDMMLKVAAGQRYRQFIFLTPQSMSSLPVSKIIRILRLKDPDRGNN
TQRSQDEEQ
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggaaaagcagcgctgtaggagacaaccccaacaaacgggtcagacctgct
gcggaggaagacgtggaggatgaagacagtgaccaggaagagccagcacagaatggacag
gtgcagtgtgctggtgaggtggtgagtgatgcagggattgtggagagcatcacactgaag
aacttcatgtgccactctctccttggcccgttcacgtttggttccaatgtcaacttcgta
gtcggcaataatggaagtggaaaaagtgccattctgacagctctcatagttgccttaggc
gggaacgcacatgccacaaacagaggtttatccctcaagggttttgtgaaggaaggagaa
agctctgctgatgtatcgataaccctgcgtaacaaaggaagggacgcttacaaacctgag
gtgtatggtacagccatcattgtagacctgagaataacacgtgaggggttgagaacctat
aaactgaggagcaagtcaggtcaaattgtctcaaccaaaaaggaagagctgttgtatatc
ctggacaattttaacatacaggtcaacaatcctgtgtcagttctcactcaggagatgagc
aaatacttcctacactcaaaaggagagggggacaaatacaagttttttatgaaagctacc
caactggatcagatgagagaggactttgtttacatcaaaaccaccaagcatgtcacagag
gataaagtcgagcaacatagtgaatgcttgaaagacttgaagcggaagtacctggagaaa
gaggaccgttacaagagcatggcatctttggatgaaatgcacaccaaactggaggagttg
cagaagcaaatggcctgggctttggtgattgagatggagaaggagttggagccaattaaa
gagaagctgcagtcagacagacattctacagagaaatatgatgagaaggtggatgaatgg
aagaacaaggtcgaggaagctgagaggaaatcaaggcagatccaggaaaagttggagggg
atcacacagcaagtccaagagctccagcccaaatgcgccgagctcaagactgaggcccag
agaagaaatacccttctcaagtctagtgaggtcactgtccacagattcaaggctaacctg
agggacctggaaaaggacaaggttcagctgtcctcaaggataaatgatctcaaactgagc
atcagccagacatcaggagcggaaagccaggccaggacggagcgtacggggcggatacag
gctgagctcgaaaacatgggtcaccacatctccactctcagccagcagattgaccaatat
cagcatgtctgcaacggtgccaaggaagaacaagtaaaaataaggagagagcttgaagtg
cttcagaggtccatcgaggccaagagaaggaacctgcagactatggagagcagtcgctcc
aatcgcctgcggcgttttggagagcacatgcctgcactcctcaacgcgatccaggaagct
cacagaaagggccagttaaagcacaaacctcgggggcctctgggataccatattagcctg
aaggacccagagttagccttgtctgtcgaagtatgtcttaaagggcagctgcaggccttc
acttgtgataaccatgacgatgagaaggtgctgcagggcctcatgtccaaagtgttccca
actggccgtagacctgccatcatcaccagcagttttctttcagtagtccatgatacaaga
aggaggggcgtgaatcaccctgaatacccctccgtgcttcaagctctagaaattgaagac
ccagttgtggcaaactgcttgattgatcaaaggggtatagagagcattctactcatcaag
aatcggacagatgcccggagagtgatgcagagcagaaaccctcctcagaactgtacccag
gccttttcaaaagagggagatcagatcttcaataaccggaattacactgctgagcagacc
agggccaactatctgtcgggagatgttgaggaggagatcaggcacttgcaggaggagata
gagaaccagaaagctcaggcatctcgataccaggaacagatgaaaaagctagatgatcac
atcaaacagaacgaagggctgctgagaagaacccaagtagagcagaagactaccaaagat
aaggccacaaagctacagctggagctgacggacctacaaaatatggaagagcctcagtca
gaggacctcaatccactggaggaagatcttcaagagattgtgtctaagatatcgtccaag
cgtgccgagtacgatgaggcccgcgctcagatggctgacttaaaggcgtcctatgagaag
gcagagcaggagtacaagcagcacaaagagcagatcaacaccttcgctgaggaagcagac
ccagtcaaggaggagctgagtaaagctgatcaggatgtgatgaagtgcaaacatcacaag
aaacactatgacgagaaacgcagtgcccatctccgcaacatacagacctttgaagccaac
cagcaaagcaaagagcaggaccttcaggcatccgtggccaaggctacaaaaatctgtcca
gagcgcctagaagtaagacggacagctaggagtctagacagtgagatcaaccgactcaag
gtgaagatcactacccagcaggaacaacagggggaccgcgaggaggttgtgaggcagtat
catgaagctctggagaactacaagaacatggcacagcaagtgaagtacctcaacagcttc
atcaaaagtcttgacagtgttatgaaccacagactccaggtgtatgctcagctcaggaga
ttcctctcggcccgctgtaaatactattttgatagcatgctggcccagagaggctacact
ggaagtatggcctttgaccacaagaatgaaaccctctccatctcggtgcaaccaggccaa
ggaaacaaggctgacttgagtgacatgcgctctctgtctggaggcgagcgctccttctcc
actgtttgctttgttctctctctttgggccatcacagaggcgcctttccgctgtcttgac
gagtttgatgtttacatggacatggtgaacaggaggatatcaatggacatgatgctgaag
gtggctgctggtcaacgctacagacagttcatcttcctgaccccacagagcatgagctct
cttccggtgagtaaaatcatccgcatcctccgtctcaaagatccagaccgtggcaacaac
acacagagaagtcaagacgaggagcagtag
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