KEGG   Anoplopoma fimbria (sablefish): 129107189
Entry
129107189         CDS       T09102                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129107189 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afb03000]
    129107189 (tbpl1)
   03021 Transcription machinery [BR:afb03021]
    129107189 (tbpl1)
Transcription factors [BR:afb03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    129107189 (tbpl1)
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129107189 (tbpl1)
  RNA polymerase III system
    TFIIIB
     129107189 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     129107189 (tbpl1)
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 129107189
NCBI-ProteinID: XP_054474574
LinkDB
Position
18
AA seq 188 aa
MDSSNDDALDIIITNVVATFRTRCHLNLRTIALEGTNVIYKPEGGKVLMKLRKPKITASI
WSSGKIICTGATSEDDAKRGARRLARVLQKLGFKVRFSAFKVVNVLAVCSMPFSIALIDF
TKKNRPIASYEPELHPAATYRIKHIKATVQVFSTGSITVTGPNVQNVATAVEHIYPLLYE
CKKPLHKK
NT seq 567 nt   +upstreamnt  +downstreamnt
atggattccagcaatgacgacgcacttgatatcattatcaccaatgtggtggctaccttc
aggaccaggtgccacctcaacctgcgcaccattgcgttagagggaaccaatgtcatctat
aagccggaaggagggaaggtcctgatgaaacttcgtaaacccaaaataacagcctcgatc
tggtcctcagggaaaatcatctgcactggagcaacaagtgaggatgacgcaaagcggggt
gctcgcaggttagcacgcgtcctgcagaaacttggcttcaaggtgaggttttcagccttc
aaagtcgtgaacgtcctggcagtgtgctccatgccgttttcaatcgccctaatagacttc
acaaagaaaaaccgacccatcgccagttatgaaccagagctccatcctgctgccacgtac
aggatcaaacatataaaggctactgtacaggtgttctccaccggcagcatcacagtaaca
ggaccaaatgtgcagaatgtggccacagctgttgagcatatctacccactgctgtatgag
tgtaagaaacccctccacaaaaaatag

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