Anoplopoma fimbria (sablefish): 129107238
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Entry
129107238 CDS
T09102
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129107238 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129107238 (ino80)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
129107238 (ino80)
INO80 complex (yeast)
129107238 (ino80)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
129107238
NCBI-ProteinID:
XP_054474645
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All DBs
Position
18:complement(6011116..6047597)
Genome browser
AA seq
1603 aa
AA seq
DB search
MASGQGGRLEAGASGSSGLAKPLYLQRLERSLRLDSFLRQTAAIFNGDITSDDSDDSDGA
LETGLSLDPSLSQHTALTVKSESCDQGDRLSEGKPLNGVLLQGKDQKADKTNLYNFSKLK
KNRKWLKSILLSDDTTDSDTDSDDSDFSLSREELHDMLRLHRYTRQHQSKFHSDQELHQY
QYYSTGLLSSHDPFYEQQRHLLGPKKKKIKDEKKFKAKLKKVKKKKKRGEGEFLDDGRPY
ITKIFAKFSHDAPLPVVKKKHLTIEQLNARRRKVWLTIAKKEIPKTFKQKTSAKNLVLTN
AKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMMLYWKKYDKVEKEHRKRAEKEAL
EQRKLDEEMKEAKRQQRKLNFLITQTELYAHFMGGKASSADGEMSQEEILRKLEDTAGHR
QIDIGGGVMVNMGQEDYDDRNAFSDSDYYKSRALRNAKEAFQIHQERTRMFDEEAKDSRC
ASVHAAVGPSSGCGFGESYSLANPSIHAGEEIPQPDIFIGKLKGYQLKGMNWLANLYEQG
INGILADEMGLGKTVQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVL
PYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQA
LKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKD
IESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQ
ALRNKISIEDLLQSSMGTSQQSHNTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLK
PFTMSKFLFRHGLIHAHNQARNKLLQVLLSPFSPNHIQQSLFHRKGDDKGSCFSFLRFID
VSPAEMSNLMLQGTLARWLALFLSLKASYRLHHQRLFGPEGEGQEEAGDSQGESGRLQPR
SKCLSHKDLILWLNRPTNFPNMQTSPVIQDLVFTALRPGMMGHTDVKIHSRNYSTTTLRP
CQLTLPPKFLLAATPRVTAVPMERYCDDRSAEYEWRVTRSGGGAVFKQCFLYGSPELASD
WLARSNAFHPQCPGGVMALYPRHGWSYIRIPDKESLITDSGKLHTLDILLSRLKNHGHRV
LIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGG
LGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICQGSIEERILQRAKE
KSEIQRVVISGGNFKPDTLKPKEVVSLLLDDDELEKKLRQRQDEKRQVEECSKVKERKRK
REKYAEKQRKNEESESKKKKEVNLVISHAPSADNSNLSADGDDSFISVEMDSAMPSPFSE
ISLSSELQPGSLPPDADADESSSDMLVIVDDPVSSAPQSRATNSPSSVSGSVSDNMNGVS
ASEAISPGRGRSARSRGRPKGSGGGTKSGGKARGRKSTAGSAAAMAGAMAGAAAASAAAY
AAYGYSVSKAGLAASSPLQPSLGRSGTSPAFNPSRSSSPRAKEAPPHRRRAPTNSWPTAT
TTTAATEQSGRARAPAVPGLDDANCTHTNVPTTHTHTHTHTHR
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggtcagggtggccgactggaggcgggggcatcagggagctctggcctggcc
aaacctctctacctgcagcgcttggaaagatccctgaggctggacagtttcctgcgccag
acagccgccatcttcaacggagacataaccagtgatgacagtgacgacagcgatggtgca
ctggagacagggctgtccctggacccctcactcagtcagcacacagctttgacagtgaag
agtgagtcatgtgaccaaggggacaggttgtcagagggaaagcccctcaatggagttctg
ctgcagggtaaagatcaaaaggcagataaaacaaacctctacaatttctccaagctgaag
aagaacaggaaatggcttaagagtattctgttgagtgacgacaccacagactcagacaca
gactcggatgactctgacttcagcttgtcccgggaggagctgcatgacatgctgcggtta
catcgctacaccaggcagcatcagagcaagttccactctgaccaggagcttcaccaatat
cagtactacagcactggactcctctcttcccatgaccccttctatgagcagcagcgccac
ctactgggcccgaagaagaagaaaatcaaagatgaaaagaaattcaaagccaaattgaaa
aaggtgaagaagaagaagaaacgaggagagggagagtttctggatgatgggcgtccttat
atcaccaagatcttcgcaaagttttcccatgatgctccgctgcccgtggtgaagaagaag
catctcaccatcgagcagctgaacgcgcggcgacgtaaggtctggctcaccatcgccaaa
aaggagattcccaagactttcaagcagaagacctctgctaagaacttagtattgaccaat
gctaaaaagttggcccatcagtgcatgagagaggttcgccgtgcagctatccaggcccag
aagaactgcaaggagacgttaccccgcgcccgccgcctcaccaaggagatgatgctctac
tggaagaagtacgacaaagtggagaaggagcacaggaagagggcggagaaggaggccctg
gagcaacgcaagctggacgaagagatgaaagaagccaagcggcagcagcgtaaactgaac
ttcctcatcacccagacagagctgtatgctcacttcatgggcggtaaagccagcagtgca
gacggggaaatgtctcaggaggaaattctgagaaagctggaagacaccgcgggccacaga
cagatcgacatcgggggaggtgttatggtcaacatgggacaggaggactatgatgatcgt
aatgccttttcagatagcgattactacaagtcccgggccttgaggaacgccaaagaagcc
ttccagattcatcaagagagaacgcggatgttcgatgaggaggctaaggacagtcgctgc
gcgtcggtacatgccgccgttggcccgtcctccggctgcgggttcggagagagctacagc
ctcgccaacccgtccatccacgcgggggaagaaattcctcagcccgacatcttcatcggc
aaactcaagggttaccaactcaagggcatgaactggctggccaacctctacgaacaggga
atcaatggaatcctggcagatgagatgggactcgggaagacggtgcagagtatcgccctg
ttggctcacttagcagagagagacaacatctggggtccattcctgatcatctctcctgca
tccacgctcaacaactggcaccaggagttcacccgctttgtgcccaaattcaaggtgttg
ccatactgggggaatccacatgatcgtaaggtgattcggaaattttggagccagaaaacc
ctttacactcaaaatgcgccgttccatgtggtgatcacgagctaccagctggtggtccag
gacgtgaagtactttcagagggtcaagtggcagtacatggttctggatgaggcccaggca
ctgaaaagcagcaccagtgttcggtggaaaatccttctgcagttccagtgtcgaaacagg
ctgctgctcaccgggacgcccatccagaacacaatggctgagctgtgggccctgctgcac
ttcatcatgcctacattgtttgattcccatgaagagttcaacgagtggttctccaaggac
atcgagagccacgctgaaaacaagtctgccatcgacgagaaccaactttccagactgcac
atgatcctcaagcctttcatgctgcgcagaatcaagaaggatgttgagaacgagctctca
gacaagatcgagatcctgacctactgccagctgacttcccggcagaggctgctctaccag
gctctgaggaacaagatctccatcgaggatctgctgcagtcctccatgggcacgtcgcag
cagtcccacaacaccacctcctccctcatgaacctggtcatgcagttcaggaaggtgtgt
aaccaccctgacctgtttgagcgccaggagactcgctctcctttccacatgtccctgaag
cccttcaccatgtcaaagttcctcttccgtcacggcctcatccacgcacacaaccaggcc
agaaacaaattacttcaagtgctgttgtctcccttctccccaaatcacatccagcagtct
ctttttcacagaaaaggtgatgacaaaggaagctgtttctccttcctgcgcttcatcgac
gtgtcaccggctgagatgtccaatctcatgctgcaaggcaccttagcaagatggttagct
ctttttctgtccctcaaagcctcatatcggctccaccatcagcgcctcttcggccctgaa
ggagagggccaggaggaagccggagactcgcagggggagagtgggaggttacagcccagg
agtaagtgtctgtctcacaaggacctaattctgtggctgaacagacccaccaacttccca
aacatgcaaaccagccctgtcatacaggacctggtgttcacagccttaagacccggcatg
atgggacacacagatgtgaagatccacagtcgaaactattccaccaccacgctgcggccc
tgtcagctaaccctaccacccaagttcctgctagctgccacgcccagggtgacagcagtt
cccatggagcgttattgtgacgaccgcagtgcagagtacgagtggcgggtgacacgcagc
ggagggggcgccgtcttcaaacagtgtttcctctacggctccccggaacttgcctcagac
tggctcgcgaggtccaacgctttccacccacaatgccccgggggtgtgatggccctctac
ccgcggcacggatggtcctacattcggatacctgataaggagagcctgatcacggacagt
ggcaaactccacaccttggatatcctgttgagtcggctaaagaaccacggacacagagtc
ctcatctactcccagatgacccgcatgatagacctactggaggagtacatggtttatcgt
aagcacacctacatgcgcctcgatggatcctccaagatttctgagcgcagagacatggtg
gctgacttccagagccggacggacatctttgtgtttctgctgagtacgagggccggaggt
ctcggcattaacctgactgctgctgacaccgtcatcttctacgacagcgactggaacccc
acggtggaccagcaggccatggaccgagctcacaggctgggtcagaccaagcaggtcacc
gtctatcggctcatctgccaggggtccatcgaggagaggatccttcagcgggccaaggag
aaaagcgagatccaaagggtggtgatctctggaggcaacttcaaaccagacacactcaaa
cccaaagaggtggtcagcctgctattggacgacgatgagctggagaagaaactgcgtcag
agacaggatgagaagaggcaggtggaagagtgcagcaaagtgaaggaacgcaagaggaag
agggagaagtacgccgagaagcagaggaaaaacgaggagtcggagagcaagaagaagaag
gaggtgaacctggtcatctctcatgcgccctcggccgacaactccaacctctccgcagat
ggagacgactccttcatcagcgttgagatggactcggccatgcccagtccctttagtgag
atctccctgagcagcgagctccagcccggctcgttacccccggacgccgacgcggacgag
agcagcagcgacatgctggtcatcgtggacgacccggtgtcctcggcgccgcagtctcgc
gccaccaactccccgtcctctgtgtctggatcagtctctgacaacatgaacggcgtttca
gcctccgaagcaatcagtcccggcagaggcaggtctgcgcggagtcgggggcggcccaaa
ggttcaggaggcggaacgaagtcgggagggaaagcacgtgggcgcaagtccaccgcgggc
agtgcggcggccatggcgggggcgatggccggtgcggcggctgcttctgcggcagcttat
gctgcttacggttacagtgtttctaaagcaggcctcgctgcgtccagccccctgcagcct
tccctgggccggtccggtaccagccccgccttcaaccccagcaggagctcctcccccagg
gcaaaggaggctcctccacaccgacgacgagcccccacaaacagctggcccacagccacc
accaccacagcagccacggagcagtcaggaagggcaagggccccagcggtcccggggctc
gatgatgcaaactgtacacacacaaatgtgcccaccacacacacacacacacacacacac
acacacagataa
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integrated database retrieval system
