KEGG   Anoplopoma fimbria (sablefish): 129107292
Entry
129107292         CDS       T09102                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129107292 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129107292 (nup43)
   03036 Chromosome and associated proteins [BR:afb03036]
    129107292 (nup43)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129107292 (nup43)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    129107292 (nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML WD40 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_DCAF4 EIF3I Vgb_lyase KNTC1_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 PSII_BNR
Other DBs
NCBI-GeneID: 129107292
NCBI-ProteinID: XP_054474716
LinkDB
Position
18:15442788..15446715
AA seq 372 aa
MESINAKYVSQKISKTRWRLVSHSSLQQPDIFATGSWDNEVNKISLWSIGNHGSSDMDDG
FEGDPQLLCEHKHDGDVLDLQFLDQDRIVTTSSTGAVTIFRHHQNSQTISVSQSWPRAHR
YPCDNAPCTGVVCSSPEIVTVGEDGKIIVFRADQEGVTRVIENADSSTIHAVTYLRTTEI
LTVNSIGQLKLWDLRQQSNAPSQILSLSGDRVPLHCVDRHPNQQHIVATGGQDGMLCVWD
VRQGSTPFSLMEAHSAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSTQSEMPSFLQGGRN
NSMISRSAMAPAGGNQSLISAWLSGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTD
GEAIFVNRQVPV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggagagtatcaatgcgaagtacgtttcccagaaaatcagtaaaacaagatggagacta
gtatcgcattcgtctttgcagcagccagatatctttgcgactggctcgtgggataacgag
gttaacaagatttccctttggtccattgggaatcatggaagttctgacatggacgatgga
tttgaaggagacccacagcttttatgtgaacacaagcatgatggagatgttctggacctt
caatttttggaccaagacagaattgtcacaacatcgtcaactggagcagtcaccatcttt
cgccaccaccaaaacagtcagacaatatcagtttctcagagctggccgagagcacatcgt
tacccttgtgacaacgctccctgtactggtgttgtgtgtagcagtcctgagatcgttaca
gttggtgaagatggcaagatcatcgtcttcagagccgaccaggagggagttactcgagtc
atagagaatgcagacagcagcacgattcatgctgtgacgtacctaaggacaacagagatt
ttgacggtgaactccattggccaactcaagctgtgggatttaagacaacagagcaacgca
ccatctcagattctctcattgtcaggggatagagtccctctgcactgcgttgacagacat
ccgaaccaacagcacattgttgccacaggagggcaggacggcatgctctgtgtctgggat
gtgcgacaaggcagcacacccttctcactcatggaggcacactctgctgaaatgtgggaa
gtccacttccacccaaccaacccagatcatctgttcacatgctcagaggatggttcactg
ctgcactgggagacttctacacaatcagagatgccctccttcttacaaggtggcagaaac
aacagcatgatttctcgcagtgcgatggccccggctggaggaaaccagtctctcatcagc
gcctggctcagtggagactccagcaaaggccgtctggagacgactcacatgctgcccagc
cagacactgtctgtcaacagtttggatgtacttggacaatgtcttgtttgtgggacggac
ggagaagccatttttgtcaatagacaggtcccagtttaa

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