Anoplopoma fimbria (sablefish): 129107380 Help Entry 129107380         CDS       T09102                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03040   Spliceosome Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129107380 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:afb03041]     129107380 (cdc40) Spliceosome [BR:afb03041]  Complex C   Other components    Step II factors     129107380 (cdc40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 EIF3I WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_Vps41 Motif Other DBs NCBI-GeneID:  129107380 NCBI-ProteinID:  XP_054474836 LinkDB All DBs Position 18:9828306..9846405 Genome browser AA seq 581 aa AA seqDB search MAAAAASLVSYGSDSDSENESTCKTGDEKMDPANPDATAHLQPLKSGPTMSVAVLNSAPE VAVKEAVETGIHLDPSLKEVTYNPTFETMFAPEFGPMNPFKSQQMAAPRNMLSGYAEPAH LNDFMFEQQRRTFSTYGYALDPSVDTHQVTAISYIGAVDEAEKNKGLTVFESGPKKTEKR KKIKGGEAGEIENFLGPWAKYIDEKDVAKPSEDEQKELDEITAKRQKKGKNEEEAPAEEK TILHVKDMYDYQGRSYLHVPQDVGINLRSADAPDKCYLPKKQIHVWSGHTKGVSAIRLFP SSGHLLLSSSMDCKIKLWEVYGERRCVRTFIGHSKAVRDICYNNSGTQFLSAAYDRYLKL WDTETGQCISRFTNRKVPYCVKFNPDEEKQSLFVAGMSDKKIVQWDVRTGEVVQEYDRHL GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC QSMDNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK TTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atggccgccgccgcagcttccctcgtttcttacggcagcgactcggattctgaaaatgag tcaacgtgcaaaaccggcgatgagaaaatggacccagcgaacccggacgccactgctcac ctccagcctctaaagtccggacccaccatgtccgtggctgtcctcaattctgcccccgag gtcgccgttaaggaggctgttgagactggcatacacctggacccttcactgaaagaagtc acctataaccccacatttgaaaccatgtttgcaccagagtttgggccaatgaacccattt aaaagccagcagatggctgcccccagaaacatgttatctggttatgcagaacctgctcac ctcaacgactttatgtttgaacagcaaaggaggaccttctccacctatggttatgctcta gatccatctgttgacacacaccaggtaaccgctattagctacattggcgcagtggatgag gctgagaaaaataaagggctaactgtttttgaaagcggaccgaagaagacggagaaaagg aaaaagatcaaaggtggagaagcaggagagattgaaaacttccttgggccatgggcaaaa tatatagatgagaaagatgtggccaaaccatcagaggatgaacagaaagagctggatgag atcacagccaagaggcagaagaagggaaagaacgaggaagaggctcctgctgaagagaaa accattctccatgttaaggacatgtatgattaccagggcaggtcctacctccacgtccct caggatgtgggtatcaacctgcgttctgcagatgctccagacaagtgttacctgcctaag aaacaaattcatgtctggtctggacacaccaagggtgtcagtgccatcagactgtttcct agctctggtcatctcctgctctcctcctccatggactgtaagatcaagctttgggaagtt tacggggagaggaggtgtgtacggacatttattggtcacagcaaagcagtgcgagacatt tgctacaacaacagtgggacccagttcctcagcgctgcctatgaccgttacctcaaactc tgggacactgaaacaggccagtgtatctcccgcttcaccaacaggaaggtaccgtactgc gtcaagtttaacccagacgaggaaaaacagagccttttcgtggccggcatgtcggataag aagatcgttcagtgggacgtcaggacaggggaggttgttcaggagtacgaccgtcacctg ggagccgtcaacaccatcacctttgttgatgagaaccgtcggtttgtgagcacgtcagac gacaagagtcttcgagtttgggaatgggacatccctgtggacttcaagtacatcgccgag cccagtatgcactcaatgccagctgtgacactctctcccaacggtaaatggctagcgtgc cagtctatggacaaccagattctgatctttggagcccaaaaccgcttcagactgaacaag aagaaagtcttcaaaggtcacatggtggctggctatgcctgccaagtggacttctcccca gacatgagctatgtggtgtcaggagatgcggatggaaagctgaacatttgggattggaag accaccaagctttaccacagaatcaaggctcatgacaaggtgtgcattagcgcactatgg catccgcatgaaacctctaaggttatcacctgcggctgggatggacaaatcaaactctgg gattag

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