Anoplopoma fimbria (sablefish): 129107440
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Entry
129107440 CDS
T09102
Symbol
nkx2.4b
Name
(RefSeq) LOW QUALITY PROTEIN: NK2 homeobox 4b
KO
K09344
homeobox protein Nkx-2.4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129107440 (nkx2.4b)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
129107440 (nkx2.4b)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
SR-25
Motif
Other DBs
NCBI-GeneID:
129107440
NCBI-ProteinID:
XP_054474903
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Position
18:complement(2086159..2090252)
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AA seq
356 aa
AA seq
DB search
MSFSPKISTPFSVSDILSPMEDSYRRFGGMEPGVYRQQQVSQPGTQLQHQDLHHHHHHHH
HHHLSSSSSSTSSSSSSAAAAAAVLGPGGPYHHHHGPHGGSQFSGAVGGFCNGGMGNVGE
LPSYQETVRSGGGGGGGGGAAWYSSPETRYPTISRFMGPSGGVNLSGLGVGGLSGLGVGG
LSGMGVGGLSGLDSGSKALVTLRRKRRVLFSQAQVLELEXRFKQQKYLSAPEREHLAGLI
HLSPNQVKIWFQNHRYKLKRQNKDKQQDLSKTTKGCRGDSSGPDQGKLMTVTQNQNQNQN
QNQNQQNQLSSTEELDLSPSPPMGLQGPVSMPQTDAALVEYTNSMMGSSVLYGRTW
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcagcccgaagatctccacccccttctcagtctccgacatcctgagcccgatg
gaggacagctaccggaggtttggaggcatggagcccggagtctaccggcagcagcaggtc
tcccagcccggtacgcagctccagcaccaggatctccatcaccatcaccaccaccatcac
caccatcacctgtcctcctcctcttcatccacatcctcctcctcttcctcagcagcagca
gcagcagcggttctgggtccaggtgggccttaccaccaccaccacgggccccacgggggg
tcgcagttctccggggccgtgggagggttctgcaacggcggcatggggaacgtgggagag
ctgccgtcctaccaggagacggtgaggagcggaggaggaggaggaggaggaggaggagca
gcctggtacagcagcccggagacccgatacccgaccatctccaggttcatgggcccgtcc
ggcggggtgaacctgtccggtctgggggtcggtggtctgtccggtctgggggtcggtggt
ctgtccgggatgggggtcggtggtctgtccggtctggactctggctctaaggccctggtg
accctgcggaggaagcgtcgcgtgctcttctctcaggctcaggtgttggagctggagncg
cgcttcaagcagcagaagtacctgtcggccccggagagggagcacctggccggcctgatc
cacctcagccccaaccaggtcaagatctggttccagaaccaccggtacaagctgaagagg
cagaacaaggacaagcagcaggacctctccaagaccaccaagggctgcaggggggactcc
agcgggccggaccaggggaagctcatgacggtgacccagaaccagaaccagaaccagaac
cagaaccagaaccagcagaaccagctgtcctccacagaggagctggacttgtcccccagt
ccgccgatgggcctgcagggtccggtcagcatgccgcagacggacgcggcgctagtcgag
tacacgaacagcatgatggggtccagtgtgctgtacgggaggacctggtag
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