Anoplopoma fimbria (sablefish): 129107456
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Entry
129107456 CDS
T09102
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129107456 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129107456 (capn3b)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
129107456 (capn3b)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C2: calpain family
129107456 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
129107456
NCBI-ProteinID:
XP_054474917
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Position
18:complement(12288171..12300449)
Genome browser
AA seq
761 aa
AA seq
DB search
MGDKKCKVPVVQDTKVKVLYETEASSGPDDKADYPSAGTNSIYSAILSRNEAVKDAKRLK
TFLELRDKYTEKKVVFEDPLFPANDSSLFYSHKPSMKFEWKRPSEICENPQFIIDGANRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVD
DRIPTCNNRLVFTKSFRNNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
ELSEAPKELYNIMRKALERGSLMGCSIDIFSATDLETRTEHGLVRGHAYSIIGLAECDEV
AKDTRIRLIRLRNPWGMVLWKGPWSANSKEWSTISTADKDNLKKQTIEASEFWLSFDDFK
RNFTKLEMCNLTPDTLQGDERQSWTVSVNEGRWVRGSSAGGCRNFPQTFWTNPQYRLQLY
EEDDDPEEGQAACTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKDFF
LYTASKAKCKTYINLREVTERIHLPPGEYAIIPTTFEAHQEGEFILRVFSEKKSTSEESE
NTIGSDKTQPIVFVSDRARANKEIEHDGIQGEKKKKPKLKLLEPEEETKEEKQFRAIYQQ
IAGEDMQICANELKMVMRNVFSKHNDIKTDGLSLETCRSMIALMDTDGTGKLNLQEFKHM
WKKIKEWQLIFKQYDKDKSGSISSFEMRNAVNDAGFHLNKQLYDIIAMRYADERLDIDFD
SFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaatgtaaagtgcctgttgttcaagatacaaaggtgaaagtgctttat
gaaactgaagcatcatctggacctgatgacaaagctgattatccttctgctgggactaac
tccatctactcagcgattctaagcagaaacgaggctgtcaaggatgccaagcgtctcaag
acgtttttggagctgcgagacaaatacacggagaagaaggtggtgtttgaagaccccctg
ttccctgcaaatgactcctcacttttctacagtcacaaaccttccatgaagttcgagtgg
aaacgtccctcggaaatttgtgaaaacccccagttcatcatagacggagccaacaggaca
gacatctgtcaaggagaattgggtgactgctggctgctggctgccatcgcctgtctaaca
gtgaacgagaagctgctgtacagagtgattcccccggaccagagcttcactgacaactac
gccggcatcttccatttccagttctggcgttatggcgaatggattgatgtggtcgtggac
gaccgcatccccacctgcaacaaccgtctagtgttcacaaaatctttcagaaataatgag
ttctggagcgctcttttggaaaaagcttatgccaagttgcacgggtcttatgaggcactt
aaagggggcaacaccttggaagccatggaggattttacgggaggagtcactgagttcttt
gagttgtccgaggcgcccaaagagctctacaacatcatgaggaaggcactggagagaggc
tcgctgatgggctgctcaatagatattttttcagcaactgatttggagacacggactgaa
cacggtcttgtcaggggtcatgcctactccatcataggcctggcggagtgtgacgaggtt
gcaaaggacaccagaattcgcctgattcgcttgcgcaatccctggggtatggtgctgtgg
aagggaccatggagtgcaaactcaaaggaatggtcgaccatttccaccgcagacaaggac
aacttaaaaaaacagactatagaggcgagtgagttctggctgtcttttgatgactttaag
aggaacttcaccaagctagagatgtgtaacttgacccctgacaccctgcagggtgatgaa
aggcagagctggacggtgtccgtgaatgagggtcgttgggtgagaggcagctctgctggc
ggctgcaggaacttcccacaaacattctggacgaacccccagtatcggctgcaactgtac
gaggaggatgacgacccagaggaaggacaggcggcctgtactgtcgtcgtggctcttatg
cagaaaggcagaaggatgcagcgccatcaaggggcaaaattcctcaccattggattttcc
atctacgaggtgccgaaagagatgtgtggacagaatcaacacctgcagaaggacttcttc
ctttacacagcctccaaagctaaatgcaagacctatattaacctgcgggaggtgacggag
cgtatccatctgcctccaggagaatacgccatcatccccacaacctttgaagcccatcaa
gaaggagagttcattctgagggtcttctctgagaagaagagcacgtctgaggaatcggag
aacacaatcgggtcggacaaaacgcagcctattgtatttgtgtcagacagagcacgagcc
aacaaagaaatcgagcatgacggcattcagggggaaaagaagaagaagccaaagctaaaa
ctactcgaaccagaggaggagactaaagaggaaaaacagttcagagccatttaccaacag
attgctggtgaggacatgcaaatctgtgccaacgaacttaagatggtcatgaggaacgta
ttctccaaacacaatgatataaagacagatggtctcagccttgagacatgtcggagtatg
atcgcactgatggacactgatgggacgggaaagctaaacctgcaggagttcaaacacatg
tggaaaaagatcaaggagtggcagctgatcttcaaacaatacgataaagacaaatccggc
tccatcagtagttttgagatgaggaacgctgttaatgatgcagggtttcacctcaacaaa
cagctgtatgacatcatagccatgcgctacgcagacgaacgactcgacatcgactttgac
agtttcatctgctgttttgtgagactagagggcatgttcagagcttttaatgcctttgac
aaagatggagatggaataataaagctcaatgtcctggagtggcttcagctgacgatgtat
tcttaa
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