KEGG   Anoplopoma fimbria (sablefish): 129107456
Entry
129107456         CDS       T09102                                 
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
  KO
K08573  calpain-3 [EC:3.4.22.54]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129107456 (capn3b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:afb01002]
    129107456 (capn3b)
Enzymes [BR:afb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.54  calpain-3
     129107456 (capn3b)
Peptidases and inhibitors [BR:afb01002]
 Cysteine peptidases
  Family C2: calpain family
   129107456 (capn3b)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III Calpain_u2 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 EF-hand_8
Other DBs
NCBI-GeneID: 129107456
NCBI-ProteinID: XP_054474917
LinkDB
Position
18:complement(12288171..12300449)
AA seq 761 aa
MGDKKCKVPVVQDTKVKVLYETEASSGPDDKADYPSAGTNSIYSAILSRNEAVKDAKRLK
TFLELRDKYTEKKVVFEDPLFPANDSSLFYSHKPSMKFEWKRPSEICENPQFIIDGANRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVD
DRIPTCNNRLVFTKSFRNNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
ELSEAPKELYNIMRKALERGSLMGCSIDIFSATDLETRTEHGLVRGHAYSIIGLAECDEV
AKDTRIRLIRLRNPWGMVLWKGPWSANSKEWSTISTADKDNLKKQTIEASEFWLSFDDFK
RNFTKLEMCNLTPDTLQGDERQSWTVSVNEGRWVRGSSAGGCRNFPQTFWTNPQYRLQLY
EEDDDPEEGQAACTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKDFF
LYTASKAKCKTYINLREVTERIHLPPGEYAIIPTTFEAHQEGEFILRVFSEKKSTSEESE
NTIGSDKTQPIVFVSDRARANKEIEHDGIQGEKKKKPKLKLLEPEEETKEEKQFRAIYQQ
IAGEDMQICANELKMVMRNVFSKHNDIKTDGLSLETCRSMIALMDTDGTGKLNLQEFKHM
WKKIKEWQLIFKQYDKDKSGSISSFEMRNAVNDAGFHLNKQLYDIIAMRYADERLDIDFD
SFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgggggacaagaaatgtaaagtgcctgttgttcaagatacaaaggtgaaagtgctttat
gaaactgaagcatcatctggacctgatgacaaagctgattatccttctgctgggactaac
tccatctactcagcgattctaagcagaaacgaggctgtcaaggatgccaagcgtctcaag
acgtttttggagctgcgagacaaatacacggagaagaaggtggtgtttgaagaccccctg
ttccctgcaaatgactcctcacttttctacagtcacaaaccttccatgaagttcgagtgg
aaacgtccctcggaaatttgtgaaaacccccagttcatcatagacggagccaacaggaca
gacatctgtcaaggagaattgggtgactgctggctgctggctgccatcgcctgtctaaca
gtgaacgagaagctgctgtacagagtgattcccccggaccagagcttcactgacaactac
gccggcatcttccatttccagttctggcgttatggcgaatggattgatgtggtcgtggac
gaccgcatccccacctgcaacaaccgtctagtgttcacaaaatctttcagaaataatgag
ttctggagcgctcttttggaaaaagcttatgccaagttgcacgggtcttatgaggcactt
aaagggggcaacaccttggaagccatggaggattttacgggaggagtcactgagttcttt
gagttgtccgaggcgcccaaagagctctacaacatcatgaggaaggcactggagagaggc
tcgctgatgggctgctcaatagatattttttcagcaactgatttggagacacggactgaa
cacggtcttgtcaggggtcatgcctactccatcataggcctggcggagtgtgacgaggtt
gcaaaggacaccagaattcgcctgattcgcttgcgcaatccctggggtatggtgctgtgg
aagggaccatggagtgcaaactcaaaggaatggtcgaccatttccaccgcagacaaggac
aacttaaaaaaacagactatagaggcgagtgagttctggctgtcttttgatgactttaag
aggaacttcaccaagctagagatgtgtaacttgacccctgacaccctgcagggtgatgaa
aggcagagctggacggtgtccgtgaatgagggtcgttgggtgagaggcagctctgctggc
ggctgcaggaacttcccacaaacattctggacgaacccccagtatcggctgcaactgtac
gaggaggatgacgacccagaggaaggacaggcggcctgtactgtcgtcgtggctcttatg
cagaaaggcagaaggatgcagcgccatcaaggggcaaaattcctcaccattggattttcc
atctacgaggtgccgaaagagatgtgtggacagaatcaacacctgcagaaggacttcttc
ctttacacagcctccaaagctaaatgcaagacctatattaacctgcgggaggtgacggag
cgtatccatctgcctccaggagaatacgccatcatccccacaacctttgaagcccatcaa
gaaggagagttcattctgagggtcttctctgagaagaagagcacgtctgaggaatcggag
aacacaatcgggtcggacaaaacgcagcctattgtatttgtgtcagacagagcacgagcc
aacaaagaaatcgagcatgacggcattcagggggaaaagaagaagaagccaaagctaaaa
ctactcgaaccagaggaggagactaaagaggaaaaacagttcagagccatttaccaacag
attgctggtgaggacatgcaaatctgtgccaacgaacttaagatggtcatgaggaacgta
ttctccaaacacaatgatataaagacagatggtctcagccttgagacatgtcggagtatg
atcgcactgatggacactgatgggacgggaaagctaaacctgcaggagttcaaacacatg
tggaaaaagatcaaggagtggcagctgatcttcaaacaatacgataaagacaaatccggc
tccatcagtagttttgagatgaggaacgctgttaatgatgcagggtttcacctcaacaaa
cagctgtatgacatcatagccatgcgctacgcagacgaacgactcgacatcgactttgac
agtttcatctgctgttttgtgagactagagggcatgttcagagcttttaatgcctttgac
aaagatggagatggaataataaagctcaatgtcctggagtggcttcagctgacgatgtat
tcttaa

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