KEGG   Anoplopoma fimbria (sablefish): 129107503
Entry
129107503         CDS       T09102                                 
Symbol
sprtn
Name
(RefSeq) DNA-dependent metalloprotease SPRTN
  KO
K24051  SprT-like domain-contaning protein Spartan
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129107503 (sprtn)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    129107503 (sprtn)
SSDB
Motif
Pfam: SprT-like SPRTN_ZBD zf-WRNIP1_ubi PRP21_like_P zf_UBZ
Other DBs
NCBI-GeneID: 129107503
NCBI-ProteinID: XP_054474980
LinkDB
Position
18:16147435..16151993
AA seq 612 aa
MDEDFLLAIRLQEQFDNEYETPSYSSNSFEENGFGQSSKKRRVEVAGGGSGVVPYWKPKA
QPERPLSIVDATWETLDPSPDVRAMFLEFNDTFFWGKLCGVEVKWSPRMTLCAGVCSYEG
RGGLCSIRLSEPLLKLRPRKDLVETLLHEMIHALLFVTQNNRDRDGHGPEFCKHMNRIND
ATGTKISVYHSFHDEVDVYRQHWWKCDGPCQNRKPYFGFVKRAMNRAPSAQDPWWEEHKR
TCGGNYNKVKEPEGYGKKGKKDGKKDGKTLEKKASGKEKPSSTTTGSGSQDIRNIIPFSG
KGFLLGAMSQSSTSSSPFQKPQVPSSPKKLFTPSSPAKSPNSPASAFPSIRSATSTGKKP
PIKKSVGNIRAFININGSPVRIPKPYSSSRSQEGDTIKQTSIEELFNSKSIKRSASQSST
SDTETKSDSLTSSNSTMSVSAASIFPKQQNNHSASFHTTSKPSPSKSRHSVVSTNTKGSP
TQPTQSQYFSHSNSDTTSGASAAGQASRKRPWDDHRSSSSIFDFFQKTLGSDSAASRESI
KTKSPAMQQRTATVTASSSSSSSSSLHSSAALHNSTPSSSSSSSSALTVSCPVCQVKVPE
SKINEHLDSCLS
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggatgaggattttttgctcgctattcgtcttcaggagcagtttgacaatgaatacgaa
acaccgtcgtattcatcaaacagctttgaggagaatggcttcggacaaagtagtaagaaa
cgcagagtggaggtagctggaggtggcagcggtgttgttccctactggaagccgaaagcc
cagcccgagaggccgctgtccatcgtggacgcgacctgggagacgctggaccccagtcct
gatgttagagccatgtttctggagttcaatgacacgttcttctgggggaaactctgcggt
gtcgaggttaagtggagccccagaatgacactgtgtgctggtgtgtgctcttatgagggc
cgaggtggtctgtgttcaatcagactcagcgagcccctgctgaagctgagaccaaggaaa
gacctggtggagaccctccttcatgaaatgattcacgcgctgctgtttgtgacccagaac
aacagagacagagacggtcatggccctgagttctgcaaacacatgaaccggatcaacgat
gctactgggacaaagatttctgtctaccacagtttccacgatgaggttgatgtgtaccgg
caacactggtggaaatgtgacggcccctgtcaaaaccgcaagccctattttggctttgtg
aagagggccatgaaccgggctccgtctgctcaggatccctggtgggaggaacacaagagg
acttgcggagggaactacaacaaggttaaggagcctgaaggatacggcaaaaaaggcaag
aaggatggtaaaaaggatgggaagactttagagaagaaggcctcaggaaaggaaaagcct
tcaagtacaaccacaggctctggatcacaggacataaggaacatcatcccatttagtgga
aaaggcttcctactgggagcaatgtcacagtcgtccacgtcttcctctccatttcaaaaa
cctcaagtaccttcttctccaaagaaactcttcaccccttcgtctccggctaaaagtccc
aattctcccgctagcgcctttccatccatcagatcagctacctccacgggaaagaagcca
cctataaagaagtctgtcggtaacataagagcttttatcaacatcaatggctcgccagtg
agaatccccaaaccctacagcagcagccgtagccaagaaggggatacaatcaaacagact
tccattgaagagctcttcaacagtaaaagcatcaagaggtcagcgagtcaatcctccacc
tcggacacagaaacgaaaagcgattctttgacgtcatcgaacagtacgatgagtgtttct
gcagcttccatctttcctaaacagcaaaataaccactcggcttccttccacacaacatct
aagcctagtcctagtaaatctagacattctgtggtttcaacaaacaccaaaggcagccct
actcaaccgacacagtcccagtattttagtcattctaatagtgacaccacatcaggagct
tctgccgctggtcaggcatcgaggaagaggccgtgggacgaccacaggagctcatccagc
atctttgacttcttccaaaagacattaggcagcgattcagcagcgtcgagggagtcaata
aagacaaaatcgcccgcaatgcagcaaagaactgccactgtcacggcctcctcctcgtcc
tcatcttcctcctctctacattcctctgcagcgctgcacaattctaccccctcctcatcc
tcgtcctcctcctctgcactgacggtcagctgtccagtatgccaagttaaggtgccggag
tcaaagatcaacgagcatcttgattcctgcctctcctga

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