Anoplopoma fimbria (sablefish): 129107624
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Entry
129107624 CDS
T09102
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129107624 (taf1a)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
129107624 (taf1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
YozE_SAM_like
Motif
Other DBs
NCBI-GeneID:
129107624
NCBI-ProteinID:
XP_054475104
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All DBs
Position
18:complement(12792279..12798557)
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AA seq
418 aa
AA seq
DB search
MDDLQRELGLFEDLQDDNNSSDDTSSKGKKSRLPLVNPMCAATPKETGFHKTTRACLELI
REALLHHRWQEAAEYMACYPQILEDPTNGQGQRYKELIWRISAEILHHHPNSKMEDYNNI
YERMKHSGVKHYLMISLEHCFHLLHKGHIEEAKHQLSVAESWRYGKESVAQYQRIKLIHA
YRSLLDYMIWCDKKYTCSTNAEYPDCVDNQDMHNYFRQASVNLKEILKKPGIWDPFVLSY
VEMLEFYEDHDEALKVLNDYAYDNTFPPNPNAHVYLYQYLKRQSAPEKDLMKVLKILHVM
VPSHELMLEYSSLRLQSEKKTDIQKALGVVLEMLDFACWRSNLDVWKRLKAIIQKLQLQE
DWRDSVAGKMAARKGWWPALHFTSFHASKDSEENPELMEVKASLTKILCPDLMLKYTA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttgcagagagagctagggcttttcgaagatttacaggatgacaacaattcc
tcagacgacacctcttcaaaagggaaaaaatcaaggctccctctggttaatcccatgtgt
gcagcgacaccaaaggaaaccgggtttcacaagactaccagagcctgtctggagctgatc
agagaagccctgctgcatcatcgatggcaagaggcagcagaatatatggcatgttaccca
caaatattagaggacccaaccaatggccaaggtcagcggtataaggagcttatttggaga
ataagcgctgagatccttcaccatcatcccaactcaaagatggaagactacaacaacatc
tatgaacggatgaaacactcaggagttaaacattacctaatgatctctctggaacattgt
ttccacctgctgcataaaggtcacatcgaggaggcaaagcatcagctgtctgtcgctgaa
agttggagatatgggaaggagtcagtagctcagtatcagaggattaaactgatccatgcc
tacaggagcttactggactacatgatatggtgtgacaaaaagtatacctgctccaccaac
gctgagtatcccgactgtgttgacaaccaagacatgcacaactacttcagacaggcctct
gtgaatcttaaggagattttgaaaaaacctggcatctgggatcccttcgtactgagttac
gttgagatgctggagttctatgaggatcacgacgaggctttgaaagtcctgaatgattac
gcatatgacaacacttttccacccaatcccaatgcgcatgtctatctgtaccagtaccta
aagcggcaaagtgctccagagaaagacctgatgaaagtattgaagatcctccatgtgatg
gttccaagccatgagttgatgttggagtacagctctctccggcttcaatcagagaaaaaa
actgacatccagaaagctttaggagtcgttctggaaatgctggacttcgcctgctggagg
agcaacctggatgtgtggaagcgtttaaaggccattattcaaaaactacagttacaagag
gactggagggactctgtcgctggaaaaatggctgcaagaaaaggctggtggcctgcgctg
cacttcacaagcttccacgccagtaaagactctgaggagaacccagagctcatggaagtg
aaggcatcactgacaaaaatcctttgccctgacctaatgctcaaatacaccgcgtga
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