Anoplopoma fimbria (sablefish): 129107748
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Entry
129107748 CDS
T09102
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129107748 (dennd4a)
Membrane trafficking [BR:
afb04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129107748 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
Motif
Other DBs
NCBI-GeneID:
129107748
NCBI-ProteinID:
XP_054475253
LinkDB
All DBs
Position
19:1000553..1019047
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AA seq
1733 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDLSKPLEEELHFDDAGPKSVTPKAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGGSLRGPQIYLCFKRGRDKPPLTDLGILYECKEKLKPGCQIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSIYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATV
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYSEENLSERQRSQLSLPSADLGP
DGTRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPSI
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNTLNKLYQQLTEGGQLNREDVQMD
HTVTDIELNGGKSLHTLELEIQEAFLSFMAAILRGYRSYLLPITQAPSEKTTDASSLFDI
QGFVKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDTSLAFFDECVDKLFTTGGKMDS
ERPEETRLIELDESHLSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLNADLLEPLEGP
NPPSAGMASRHSSPASPTAIFRRSKQEIKSAQRMAKTHSSMPQMWSKCLLRHCYGLWFIC
LPGFVGTCHSKVRALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLQFKQAGRKQQTPH
RDPQLSDGSDLDTVSHGSLDSANDSAERASIDTDFTKMDSSDDGCSTGGQSDQGYDSLSK
EEERICSSESNNSPAVEDKGARQSTLENEVPISSISPSTRNCKSTDISAGNGNRLVSSPS
SDTILCRPLPKAQRPKSLDLSGGQESLRLTVPHLCSTKQHHLAADRLHGVEEEETETDKE
KPLVERSVSCSSAVERPGGSRVRSVSCSAGSVMRTGIERGFDPLSLMATDAVQECDQESS
GTPTARRDLAEEIEMYMHNGNSPLSSRTSSMNLQNPSSPLFRSASSPHTSPQPSTLLRSN
THLPLPVKSKERLRSSPSLPLGVCAKDRERPSSLVSPSSPTPSSSSFSMESLFTPSLDIF
KSSFISAGKGVAEKASRFYSRLSSQTSLTQETNYDRISVSSLTSGEADCSSLLDNDSCLD
PDGFTSPQHGSVSRLRRSPVVGNTNLGSPSNPNRVFRHNSFSGGLALPSKTPRTPDSSPD
SSRFQPTPNYTIEVLMSSSSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFL
NVEIKDLRPQSRSFKESNPVTEEITLATLKPEAKVSEADCEAESSAAPLEKQESSGRSGP
TQVTVPYLSPLVLWKELESLLVNEGDEAISSPTVVDQHPIVFWNLVWYFRRLELPSNLPA
LILASQHCSHGDQTPQSISSEDSKQVLVRIMWDNLKLHKDKVQPCYVLWNTHCANSLVRS
GLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQIIQLLGPELGFKRQRSLYRDLLFLALGS
LGKNNININAFDREYKLAYDRLTPSQVKLTHNCDRPPGAGVMECRRTFGQPSL
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagataaagggcctcgtgtagccgattactttgtggttgccggcctcacagac
ttgtccaaacctctggaggaagagcttcactttgacgatgccggccccaagtctgtgaca
ccaaaagcccctatcaccgacgtagctgtggtgatccgctccctgggtgaagaggtaccc
ccgggtttcacctgtgttgaaagcaccccctcaggcctctctgcagagctcaatggaggt
agcctcaggggcccgcagatatacttgtgcttcaagcgaggcagagataagcctccactg
acagatcttgggattctgtacgagtgtaaagagaaactgaaacctggatgtcaaatcgtc
cagaccacgccctcaggtcgccctgccaacatcagcagctcgtcgtcccaacgcatctac
atcacctaccgccgcgccccgaagagccaaccccacacctcactggctgtcactgatgtc
tgcatcatcatccccggcaagggggagacgcctcctcacaccttctgcaaggtcgacaag
aacctcaacagcagcatgtggggatcctcaatctacctttgttacaagaagtctctggct
aaagcaaacacaattgcatacaaagcaggtctgctgtgtaggtaccctgaagaggactac
gagtccttcccactgcctgagtcggtgcctatgttctgcctgccgatgggggcgacggtc
gagtgctggccagcacacaccaaacactctctgcctgttttttccacatttgtactgacg
ggtgcctctggagagaaggtgtacggagcagccatacagttttatgagccttactcagag
gagaacttgtctgagcgtcagcgctcacagctcagcctgccaagtgctgatcttggacct
gacgggaccaggagtgtttacagcaacaagagcatctgtctgctctctcactggcccttt
ttccagtccttcaggagcttcctcactttcctctaccgatactccatctctggaccacat
gccctgcctattgaaaagcacatctctcacttcatgcaaaatgtgccattcccctccatt
caaagaccacgcatcctagtgcagctgtctccacatgacagcctgatactcagccaacct
gtgtcctctccgctgcctctaagtggtggtagcctctccacgttactgctgaatctgggc
ccgaagaacgcagccactctgctggtgctggctgtcacagagcacaagatcctggttcat
tccctgcgtccagctgtgctcacaagtgttacagaggcccttgtgtccatgattttcccc
ttccattggccgtgcccgtacatccctctgtgcccgctggcactggccggtgtcctcagt
gccccgtgccctttcatcgtgggtgtggactcccgatacttcgacctttatgttccccca
gctgacatcagctgtgtggacctggacaccaacacaatctcccaaaaagatgacaagaag
gctttaacgtggaaaatcttgcccaggagagcctgcaaacatcttctgaatactctgaat
aagctctatcagcagctcactgagggtggtcagctgaaccgtgaagatgtgcagatggat
cacacagtaactgacattgagctcaatggtgggaagagcctccatactctggagctggag
atccaggaggccttcctgagcttcatggcagccatcctacgaggctaccgttcctacctg
ctgcccatcactcaagccccctctgagaagaccaccgatgccagctccctcttcgacatc
caaggcttcgtaaagagcagagaccgctcccaccagaggttttactccctcatgaccaag
actcaaatgttcagccgtttcatagaggagtgctcctttgtcagtgataaagacaccagc
ctggctttctttgatgagtgtgttgataagctcttcaccactggaggcaagatggacagt
gagcggccagaagaaaccagactgatcgaactggatgaatcccacctcagtgagcacacg
gtctatatcaaccctccagagctgcctcctctaccacagggagaagagcatcctctgtgc
tatagctactctgggttccctgtactgaatgctgaccttctggaaccgctggagggacca
aatcctccatcagcaggcatggcctcacgccacagcagcccagccagccctacggccatc
tttaggcgctctaaacaggagatcaaatcagctcaaaggatggccaaaacgcattcatct
atgcctcagatgtggtccaagtgtctgctgcgtcactgctatgggctttggttcatctgc
ctaccagggtttgttggcacctgccactcaaaggtgcgggctctgcgtacagcttacgat
gtgctcagaaagatgcaggacaagaagttgcaggctccagatgaggtgtgttaccgtgtg
ttgctgcagctgtgtgggcagtacagccagcctgtcctcgctgtcagggttttgtttgag
atgaagaaagctggagttcaacccaacgccatcacctacggttactacaacaaggcggtg
ttggagagcacctggccctctaccaccagaggaggatactttttgtggggaaagctgagg
aacgtggttttaggtgtgcttcagttcaagcaagcagggagaaagcaacagacgccgcac
agagatcctcagctttcagacggcagtgatcttgacacagtcagtcatggcagtttggac
agtgctaatgactctgctgagcgtgcttccatcgacaccgacttcactaaaatggactcc
agtgatgatggatgtagtacaggtggacagtcagaccaagggtacgattcactatccaaa
gaagaggagaggatttgcagcagtgagagcaacaactcaccggcggtggaagacaaagga
gcgaggcagtccacacttgagaacgaggttccaatcagcagcatctctccttctacaaga
aactgcaaatcaacagatatcagtgctggcaatggcaacaggctggtttccagtccatca
agtgacaccattctgtgtcgacctctgccaaaagcacagaggccaaaatctctggacttg
tctggtggacaagaaagtcttagactcaccgtccctcacctttgctcaacaaagcagcat
cacctagctgctgacagactgcacggggtagaagaagaggagacagagactgataaagag
aaacctctggtggagagaagtgtcagctgcagcagtgcagtggagaggccaggtgggtcc
agggtgaggagtgtcagctgcagtgctgggagtgtgatgagaacaggtattgagaggggg
tttgatcccctgtcactgatggcgacagatgcggtacaagagtgtgatcaggagagcagc
ggcacgccaacagcccgccgcgacctcgctgaagaaattgagatgtacatgcataatggc
aacagccctctgagtagccgcacatccagtatgaacctgcagaacccctcaagccctctg
tttcgatctgcctcgtctcctcacacctccccacaaccctccaccctgcttcgctccaac
acacacctcccgctgcctgtgaaatccaaggagaggctgaggtcgtcaccgtctcttcct
ctgggtgtctgcgccaaagacagggagagaccttcctctttggtgtcaccctcctcacct
actccatcgtcctcatcgttctccatggagtcactgttcaccccatctctggacatcttt
aagagcagcttcatatcagcagggaagggcgtggctgaaaaggccagccgcttctactcc
cgtctgtcctcccagacttcattaacacaggagacaaactatgaccgcataagtgtatcc
tcactgacatcaggagaagcagactgctcctcgctgcttgataatgactcctgtctggac
ccagatggctttacttctccccagcacggcagtgtatcccgactcaggaggagcccggtt
gtgggtaataccaacctgggaagccccagcaaccccaacagagtgttcagacacaactcc
ttctctggtggtttggcacttccttctaaaacccctcgcactccagattcctcccccgac
agcagccgcttccaacccactcccaactacaccatagaggtgctgatgtccagctcttca
ctttgcaagacgtgtgactgtctggtgtatgacgaggagatcatggctggctggacggca
aacgactccaatctcaacagcacttgtcccttttgcggcacagccttccttcctttcctc
aatgtggaaatcaaagacctgagaccacagagcaggtcttttaaggaaagtaatcctgtt
acagaggagatcacgttggctactctcaaacccgaggccaaagtttctgaggcagactgt
gaagctgagtcatctgctgctcctctggagaagcaggagagcagtgggagatctggtccg
actcaggtgacggtgccctacttgagccccctggttctgtggaaggagctggagagcctg
ctggtaaatgagggcgacgaggccatctcttcccccactgttgtcgaccaacaccccatc
gtcttctggaacctcgtgtggtacttcagaaggctggagctgccgagtaacctgccggct
cttatcctggcctctcagcactgtagccatggagaccagactcctcagagcatttcttcc
gaggacagtaagcaggtgctcgtcaggattatgtgggacaacctgaagttgcacaaagac
aaagtccaaccctgctatgtcttgtggaacacacattgtgcaaactccctggtgcgctct
gggctgtgtgaagaaggccagctcttcactgtggagctactgcagggttttgtgaggagc
ataaagaagagtgatgtctatcagcccatgagccagatcatccagctactggggccagag
ctgggtttcaaaagacagaggagcctctacagagatttattgttcctcgctctggggtct
ttgggaaagaacaacattaatatcaatgcttttgaccgggagtacaagttggcatatgat
cgcctcacccccagccaagtaaaactaacacacaactgtgaccggccccccggagcaggg
gtcatggagtgcaggaggacttttgggcagcccagtctgtaa
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integrated database retrieval system
