Anoplopoma fimbria (sablefish): 129107803
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Entry
129107803 CDS
T09102
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129107803 (rfwd3)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129107803 (rfwd3)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129107803 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
WD40
WD40_CDC20-Fz
EIF3I
WDR55
zf-rbx1
Beta-prop_EML_2
Rtf2
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-C3HC4_3
Beta-prop_WDR75_1st
WD40_Prp19
zf-RING_11
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_2
CFAP43_N
Beta-prop_EML
NSRP1_N
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
129107803
NCBI-ProteinID:
XP_054475330
LinkDB
All DBs
Position
19:27531883..27545020
Genome browser
AA seq
735 aa
AA seq
DB search
MLSLQMEAMEVDSPGEMRGGGGGGGRQHAVAVVAAAAAGDASAPHVISDSGSSTEVDEDD
DEDNEGGRTAVRAPPRLPATWAFSQRAVGRSAAAPSAAHGAPIRRRLRQGLRVHYPSQTA
APSRGFPEFLLRAPAASVAEPESGSTTEVSESDEEEEVERVEGPPAAPELVNPAPPASPR
LSASAQHTRPQEAGPTNSSSAADGERTEAQNKNVKPVPVASASVQPAASEEGEGDICSIC
FEAWTTAGEHRLSTLRCGHLFGFTCIQRWVKAQGPSAKCPQCNKKAKRSDIVLLYAPKLR
ALDNSEQESLKKSLEQEQSLRRKAELESAQYKLKLQVVTNKYGQAQQELQELRALIAQAG
RSSLSSSSSSSSSSASSSLLLLGLSQRADGSRSAQYGFSKAVLVSQAGGSRVLSFCEPLS
CLLASQPSPHSTLVPGCGVKMVSVVNMKASQYVPIHSKQIRGLSFNRQNDSLLLSAALDN
TIKLTSLLTNTVVQTYNAGKPVWSCCWCLDNSNYVYAGLSNGSVLVYDTRDTSTHVQELQ
PLRSRCPVASLCYVPRAASSSFPCGGLIAGSLEGGCFWEQVNETTYRPHLLPLESAGCTD
IQVETESRHCLVTYRPGRSNPSLRCVLMALTRTPQQDSSQLPSCSCSPVQTFGAGSSCKL
LTKNAVFRSPGGAGTLVCAGDEASNSTMVWDAASGSLLQKLPADLPVLDISPFSVNGEHF
LASLTEKMLKLYRWE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccctccagatggaggccatggaggtggactccccaggggagatgcggggagga
ggaggaggcggcggcagacagcacgcggttgctgttgttgctgcagcagcagcaggagat
gccagcgcgccacacgtcatctcagactccggcagcagcaccgaggtggacgaggacgac
gacgaggacaatgaaggggggcggacggcggtgcgtgcaccccccaggcttcctgccacc
tgggcgttcagtcagagagcggtgggtcgctctgcagccgcaccttcagcagctcacggg
gcgccaatacggaggagactcaggcagggcctcagggttcactaccccagccagactgca
gcgccctccagaggctttccggagttcctgctccgtgcgccggctgccagcgtggccgag
ccagagtccggcagcaccaccgaggtcagcgagtctgacgaggaggaggaggtagagcgt
gtagaaggcccgcctgctgctccggagcttgtgaacccggcgccgcctgctagccctcgc
ctcagcgcctccgcccaacacacacgaccacaggaagccggaccgaccaactccagttca
gctgcagatggagagaggacagaagctcaaaataagaacgtcaagccggtccctgtggcc
tcggcgtccgtccagccagcggcgtctgaagagggcgaaggcgacatctgctccatctgc
tttgaggcgtggacgacggcgggggagcaccgcctgtccacgctgcgctgcggacacctg
ttcggcttcacctgcatccagcgctgggtgaaagctcagggcccgtccgctaaatgtcca
cagtgcaacaagaaggcgaagcgctcggacatcgttctgctctacgctccaaagctcaga
gcgctcgacaactcggagcaagagagcttaaagaagtctctggagcaggagcagtctctg
aggaggaaggctgaactggaatcagctcagtacaaactgaagctgcaggtcgtcaccaac
aaatacggacaagcacaacaagagctgcaggagctgagggctctgatcgctcaggccggc
agaagctccctctcctcctcttcctcctcgtcctcctcctcggcatccagctcgctcctc
ctcctcggtctgtcccagcgggccgacggctccaggtcggcccagtacggcttctccaag
gcggtgctggtgtctcaggccggcggctccagggttctgtccttctgcgagcctctgagc
tgcctgctggcctcgcagccttcgcctcactccacgctggtccccggttgtggcgtgaag
atggtgagcgtggtcaacatgaaggcgagtcagtacgtccccatccacagcaaacagatc
cgaggtctgtccttcaacaggcagaacgacagcctgctgctgtcggctgctctggacaac
accatcaaactgaccagtctgctgaccaacacggtggttcagacgtacaacgctggtaaa
cccgtgtggagctgctgctggtgtttggacaacagcaactacgtctacgccggtctgagc
aacggctccgtgctcgtctacgacaccagagacaccagcacccacgtccaggagctgcag
ccgctacgctccaggtgtcccgtggcgtccctgtgctacgtcccgcgggcggcgtccagc
tccttcccctgtggcgggctgatcgccggctccctggagggcggctgcttctgggagcag
gtcaacgagaccacgtacagaccgcacttgctgccgctggagagcgccggctgcaccgac
atccaggtggagacggagagccggcactgcctggtcacctaccggccaggacgctccaac
ccgtccctgcgctgcgtcctgatggcgctgacccggacgcctcagcaggactccagccag
ctgcccagctgctcctgctctcccgtgcagacgttcggcgccggctcgtcctgcaagctg
ctcaccaagaacgccgtcttcaggagtccgggcggcgccgggacgctggtctgcgccggg
gacgaggcgtccaactccaccatggtgtgggacgcagccagcggctctctgctccagaag
cttccggccgacctgcccgtgttggacatcagcccgttctcggtgaacggcgagcacttc
ctggcgtcgctcacggagaagatgctgaagctctacaggtgggagtga
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integrated database retrieval system
