Anoplopoma fimbria (sablefish): 129107827
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Entry
129107827 CDS
T09102
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04620
Toll-like receptor signaling pathway
afb04621
NOD-like receptor signaling pathway
afb04622
RIG-I-like receptor signaling pathway
afb04623
Cytosolic DNA-sensing pathway
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129107827 (irf7)
04621 NOD-like receptor signaling pathway
129107827 (irf7)
04622 RIG-I-like receptor signaling pathway
129107827 (irf7)
04623 Cytosolic DNA-sensing pathway
129107827 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129107827 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129107827 (irf7)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
129107827 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
129107827
NCBI-ProteinID:
XP_054475371
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All DBs
Position
19:7103259..7107454
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AA seq
443 aa
AA seq
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MQSLPKPQFASWLIEQVETGQYAGLRYDGQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKISEFPNDKARWKTNFRCALNNLTVRFKMIRDNSKNSEDPHKIYEIFNTEYNYESQATQ
ESQEDSGMTPDIYSSPIEYFPSGNEHNLLNNFMALDLGNQTSENQLWAEDYGQHNPTVPG
SYPAAAAAAAAENHPQPLPEQPSYCEVNPPPVLSSPLQQPSIYDLEISIHYRKKEMLKIT
LATALLQLHYQQEAPDLNAHHLCFPSTESLLDHKQVEYTNRILNSIQRGLFLQVRDTGIY
AWRQDRCHVFASTSDPSVAHPDPRKLPQNTMVELLSFEKYVNELKQFKENNGGSPEYAIN
MCFGEKFPDGKPLEKKLIVVKVVPLICRHFHEIAQMEGASSLHSANVSLQISHNSLFDLI
NSIFGLPIVEEPARAAAPFLPQC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccttcccaagcctcagtttgccagctggctcatagagcaggtggagacgggc
cagtacgcgggcctccgctatgacggccaaaacaagttcagagtcccctggaagcacaac
tccagaaaggactgcaatgatgaagacagtaaaatattcagggcatgggcagtggcgagc
ggaaagatcagcgagttccccaacgacaaggccaggtggaaaaccaacttcagatgcgct
ctgaacaacctcacggtgcgcttcaagatgataagggataactccaagaattcggaggac
cctcataaaatctatgagatcttcaacactgagtacaactatgaaagccaggcaacacaa
gagtcccaggaggattctggcatgactccagatatctacagctcccccatagagtacttc
ccctcaggaaacgagcataatctacttaacaatttcatggccttggatcttggcaaccag
acatcagagaatcagctgtgggcagaggactatggtcagcacaacccaactgtccctgga
agctatccagcagcagcagcagcagcagcagctgagaaccacccacagcctttaccagag
cagccttcttactgtgaggtaaatcctccaccagtcctaagttcacctctgcagcagcca
agtatttatgacctggagatctccatccactacaggaaaaaggaaatgctaaagatcaca
ttggccactgcccttctccagctccactaccagcaggaggcccctgatctcaatgcccat
catctctgctttccctcaacagagagtctgctggaccacaaacaggtggagtataccaac
cgcatccttaacagcatccagagaggactgttcctgcaggtacgggacactggtatttat
gcctggaggcaggacaggtgccacgtgtttgccagcaccagtgaccccagtgtggctcac
cccgacccaagaaagctgccccagaacaccatggtggagctcctcagctttgagaagtat
gtaaatgaactgaagcagtttaaagagaacaacggtggctctcctgaatacgccatcaac
atgtgctttggagagaagtttcctgatggaaaacctttggagaagaagctcatcgtagtc
aaggttgtccctctgatctgtcgacactttcatgagatcgcccagatggaaggggcttcg
tctcttcacagcgctaacgtcagcctgcagatctcacacaacagcctctttgatttaatt
aactccatctttggtctgccgatagttgaagagccagcacgggctgctgcaccttttcta
cctcagtgctga
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