KEGG   Anoplopoma fimbria (sablefish): 129107846
Entry
129107846         CDS       T09102                                 
Symbol
stx1a
Name
(RefSeq) syntaxin-1A isoform X1
  KO
K04560  syntaxin 1A
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    129107846 (stx1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129107846 (stx1a)
Membrane trafficking [BR:afb04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    129107846 (stx1a)
SSDB
Motif
Pfam: Syntaxin Syntaxin_2 AAA_13 ATG17_like PspA_IM30 ALIX_LYPXL_bnd Ferritin FlgN Spectrin_Anc-1 Lzipper-MIP1 CCDC28 SNARE Phage_GPO FUSC Laminin_II DUF948 DUF848
Other DBs
NCBI-GeneID: 129107846
NCBI-ProteinID: XP_054475446
LinkDB
Position
1:20360155..20413405
AA seq 358 aa
MKDRMQELKHATIYSILLPSITVWLKQVKAQLRGMIQGKETTEEEDEVAVGIDKGFMDEF
FEQVEEIRGFIESLAEKVEEVKRQHSAILASPNPDEKTKAELEDLMADIKKLANKIRSKL
KSIQQIIEQEESQNKSSADLRIRKTQHSTLSRKFVEVMSEYNTTQSDYRERCKGRIQRQL
EITGRNTTNEELESMLESDNPAIFTSGIIMDNITEQAMNEIETRHNEIIKLENSIRELHD
MFMDMAMLVESQGELVNNVERNVLGAHDYVEQAKENIPKCKKFKKTGRRVRSKMHTFYQL
NNYILFPFSLSASPSLSFSFSPIIYPLSLTSSICIHSSSCLHIWLPMSSSCLPLLLCN
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgaaggaccgcatgcaagaacttaaacatgcaaccatatacagcatattgctgccgagc
attactgtgtggctaaagcaggttaaagcccagctgagaggaatgattcaggggaaggag
acgacagaggaggaggatgaagttgctgttgggattgacaaaggctttatggatgaattc
tttgaacaggtggaggagatccgggggtttatcgagtctctggcagagaaagtagaggag
gtgaagaggcagcacagcgccatcctcgcttcacctaacccagatgagaaaacgaaggcg
gagttggaggatcttatggcagacatcaagaagttggccaacaaaatacgttccaaatta
aagagtatccagcaaatcattgagcaagaagaaagccagaacaagtcatcagctgacctg
aggatacgcaagacacagcactccacgctatcccgtaagtttgtcgaggtgatgtcagaa
tacaacaccacccagtcggactacagggagcgctgcaaaggacgcattcagagacagctg
gagatcactgggagaaacacaacaaatgaggagctagagagcatgttggagagcgacaac
ccggccatctttacctcggggatcattatggacaacatcaccgagcaagctatgaatgag
attgagacgcggcacaatgagatcatcaagctggaaaacagtatcagagagcttcacgac
atgttcatggacatggccatgctggtggagagccagggtgaactggtgaacaacgttgag
cgaaatgtgctgggcgcccatgattatgtggagcaggcaaaggagaacatcccaaaatgc
aaaaagttcaaaaagaccggcaggcgggtgagaagcaagatgcacacattctaccaactg
aataattatatcctctttcctttctccctttctgcctccccttctctctccttctcattc
tcacccattatttatcccctttccctcacctcctccatctgtatccactcctcttcctgc
ctccacatctggctccctatgtcctcttcatgtcttccactcctcctctgtaactaa

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