Anoplopoma fimbria (sablefish): 129107846
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Entry
129107846 CDS
T09102
Symbol
stx1a
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129107846 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129107846 (stx1a)
Membrane trafficking [BR:
afb04131
]
SNARE
Syntaxin (Qa)
Stx-PM
129107846 (stx1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
AAA_13
ATG17_like
PspA_IM30
ALIX_LYPXL_bnd
Ferritin
FlgN
Spectrin_Anc-1
Lzipper-MIP1
CCDC28
SNARE
Phage_GPO
FUSC
Laminin_II
DUF948
DUF848
Motif
Other DBs
NCBI-GeneID:
129107846
NCBI-ProteinID:
XP_054475446
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Position
1:20360155..20413405
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AA seq
358 aa
AA seq
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MKDRMQELKHATIYSILLPSITVWLKQVKAQLRGMIQGKETTEEEDEVAVGIDKGFMDEF
FEQVEEIRGFIESLAEKVEEVKRQHSAILASPNPDEKTKAELEDLMADIKKLANKIRSKL
KSIQQIIEQEESQNKSSADLRIRKTQHSTLSRKFVEVMSEYNTTQSDYRERCKGRIQRQL
EITGRNTTNEELESMLESDNPAIFTSGIIMDNITEQAMNEIETRHNEIIKLENSIRELHD
MFMDMAMLVESQGELVNNVERNVLGAHDYVEQAKENIPKCKKFKKTGRRVRSKMHTFYQL
NNYILFPFSLSASPSLSFSFSPIIYPLSLTSSICIHSSSCLHIWLPMSSSCLPLLLCN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcatgcaagaacttaaacatgcaaccatatacagcatattgctgccgagc
attactgtgtggctaaagcaggttaaagcccagctgagaggaatgattcaggggaaggag
acgacagaggaggaggatgaagttgctgttgggattgacaaaggctttatggatgaattc
tttgaacaggtggaggagatccgggggtttatcgagtctctggcagagaaagtagaggag
gtgaagaggcagcacagcgccatcctcgcttcacctaacccagatgagaaaacgaaggcg
gagttggaggatcttatggcagacatcaagaagttggccaacaaaatacgttccaaatta
aagagtatccagcaaatcattgagcaagaagaaagccagaacaagtcatcagctgacctg
aggatacgcaagacacagcactccacgctatcccgtaagtttgtcgaggtgatgtcagaa
tacaacaccacccagtcggactacagggagcgctgcaaaggacgcattcagagacagctg
gagatcactgggagaaacacaacaaatgaggagctagagagcatgttggagagcgacaac
ccggccatctttacctcggggatcattatggacaacatcaccgagcaagctatgaatgag
attgagacgcggcacaatgagatcatcaagctggaaaacagtatcagagagcttcacgac
atgttcatggacatggccatgctggtggagagccagggtgaactggtgaacaacgttgag
cgaaatgtgctgggcgcccatgattatgtggagcaggcaaaggagaacatcccaaaatgc
aaaaagttcaaaaagaccggcaggcgggtgagaagcaagatgcacacattctaccaactg
aataattatatcctctttcctttctccctttctgcctccccttctctctccttctcattc
tcacccattatttatcccctttccctcacctcctccatctgtatccactcctcttcctgc
ctccacatctggctccctatgtcctcttcatgtcttccactcctcctctgtaactaa
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