Anoplopoma fimbria (sablefish): 129107847
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Entry
129107847 CDS
T09102
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129107847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129107847
Membrane trafficking [BR:
afb04131
]
Exocytosis
Others
Others
129107847
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129107847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
Rod_CreS
RBD-FIP
AAA_13
CCDC192
CCDC18_1st
DUF5798
ATG16
Motif
Other DBs
NCBI-GeneID:
129107847
NCBI-ProteinID:
XP_054475407
LinkDB
All DBs
Position
19
Genome browser
AA seq
1109 aa
AA seq
DB search
MYGSARSVGRGDANHSGGRDGGGSGNQGSGRSPRLPRSPRMGHRRTNSTGGSGGGPGGAG
GKTLSMENIQSLNAAYATSGPMYLSDNEVAMADHIPKSDRTMTTMGRQRVTYGSRSTSSS
VVAASTPNISTSVSGNAVLPAGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EILRENEMLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVIQ
DEAQHLQMTVQALQDELRIQRDLNQLLQQDPSIQGRDLALTSEPTEENYRRLHAEHERQA
KELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGQSAKASEEDQERTRRLAD
AEMHRHHLESLLDQRDREINALREELHRRYEGTPESTKTKALQTVIDMKDAKINSMERGL
RDMEEELLMLKSNGLLSCEERQEEMKQMEVYRSHMKFMKNKMEQVKQDLSRKETEMLGLQ
TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKEATLNKKSKQIQ
EMSEEKGTLNGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQA
DTSNTDTALTTLEESLAEKERIIERLKDQRDRDDREKTEEIDSNKKELKELKERLSLLQG
DLSDRETSLLDLKEHASSLASSGLKKDSKLKSMEIAFEQKREECLKVENQLKRAQNATLE
AQANTELAERIKNLEQDVARHKEDSGKAQAEVDRLLEILREMENEKNDKDKKINELERQM
KDQSKKVASLKHKEQVEKSRNARLVDEARKREDNMSESSQQVKDTLRQKSERIEELEEAL
RESVQITAEREMVLAQEEAARSLQEKQMEELLGAMEKVKQELESMRAKLASTQQSLGEKE
AHLSTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALLKREK
DRLVQQLKQQTQNRMKLMADNYEDDHLKTVPDQTNHKPSPDQMIPPLLALSQNRSKLKLY
IAHLTDLCHDRDPSILSQLTPPSHYHHSDPEDWEEELQKMSVEQLERELEMCEKESGELQ
EYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagtgcccgctctgttggcagaggagatgccaaccatagtggcggtagagat
ggaggtggttccggcaatcagggatctggccgttcccctcgcctcccccgctctcctcga
atgggacaccgtcgcaccaacagcaccggaggcagtggaggggggcctggaggagcaggt
ggcaaaacactttccatggagaacatccagtccctcaacgcggcctatgccacctcagga
ccaatgtacctgagcgacaacgaggttgccatggcagaccacattcccaaaagtgatcgg
acaatgacgaccatggggagacagagggtgacatacgggtcaaggagcaccagcagtagt
gtcgtggccgctagcacccccaacatctccacctcagtgtctggcaatgcggtgctgcca
gcaggcatgatggcaggtgatgctctagcttttggggaccaccacatggcttccactgta
ccccattctctgaggcaggccagagataacaccatactggacctgcaagcccaactgaaa
gagattctgcgtgagaacgagatgctccggcgagaggtggaagttaaggagagcaagctc
agctcctccatgaattctatcaagaccttctggagcccagaattaaaaaaggagcgagct
ctcaggaaagatgaggtttccaagatcaccgtctggaaggagcaataccgtgtgattcaa
gatgaagcacagcatctccagatgactgttcaggctctccaggatgagctgaggatccag
agggacctcaaccagctgcttcagcaagacccctccatccaaggcagggacctggccctc
acgtctgaacccacggaggagaactaccggcgactacacgcggaacacgagaggcaggcc
aaagagctcttcctccttagaaagaccctcgaggagatggagctaaggatcgatacacag
aagcaaaccctgggagccagagacgagtccatcaagaaacttctggagatgctgcagagc
aaagggcaatctgccaaggcatcagaggaggaccaggagcggaccaggaggctggctgat
gcagagatgcacaggcatcaccttgagagtttactggaccagagagaccgagagattaat
gcactaagagaggagctgcaccgtcgatacgagggaacccctgagtccacaaaaactaag
gctctacagactgttatcgacatgaaggatgcaaaaattaattcaatggagcggggcctg
agagacatggaggaggagctgctaatgctgaaatccaatggacttctgagctgtgaggag
cgccaggaggagatgaagcagatggaggtctaccgcagccacatgaaattcatgaagaac
aagatggagcaggtgaagcaggacctctccaggaaggaaaccgagatgcttggtttgcag
accaaactggagacgcttaccaaccagttctcagacagcaagcaacacattgaagtcctc
aaggaatccctcactgccaaggagcagcgagctgccatcttacagacggaggtggatgcc
ttgcgcctgcgcttggaagagaaggaggcgactctgaataagaagagcaagcagatacag
gaaatgtcagaagagaagggcacactcaacggggagatccacgacctcaaggacatgctg
gatgtcaaggagcgcaaagttaatgtgctacagaagaagattgagaacctgcaggagcag
ctgagggacaaagagaagcagatgagcagtctgaaggagagagttaagtctttacaggca
gacacctccaacactgacactgctctcaccacactggaggagtctcttgcagaaaaggag
cgcatcattgagcgtctaaaagaccagcgagacagagacgaccgggagaagacggaggag
atcgacagtaacaagaaggagctgaaagagttgaaggagagactgagcctactgcaggga
gacctgtcagacagagagacgtctttgttggacctgaaggagcatgcgtcatctctggcc
tcctctggtctgaagaaggactccaaactcaagagtatggagatcgcctttgagcagaag
agggaggagtgcctcaaagtggagaatcagcttaaaagggctcaaaacgcaaccctggaa
gctcaggccaacactgagctggccgagcgcattaagaacctggaacaggatgtggctcgc
cacaaagaggattctgggaaggcccaggctgaggtggaccgcctgttggagatccttcga
gaaatggagaatgagaaaaatgacaaggacaaaaagatcaatgagctggagaggcaaatg
aaggaccagtcgaagaaggtggcgtctctgaagcacaaggagcaggtggagaagagcagg
aatgctcgacttgtggatgaggccaggaagagagaggacaacatgtctgagagctcccag
caggtgaaggacactctgcgtcagaagtcggagcgcatcgaggagctggaggaggccctg
agagagagcgttcagatcactgcagagcgagagatggtgctggcacaggaggaggctgcc
aggtcactccaggagaaacagatggaggagctgctgggtgccatggagaaagtgaagcaa
gagctggagtccatgagggccaagcttgcctccacccagcagtctctgggtgagaaagag
gcacacctctcaacgctgcgagctgagcgcaggaaacacctggaggaggtgctggagatg
aagcaggaggcgctgctggctgcaatcagcgagaaggacgctaacattgcccttctggag
ttgtcctcctctaagaagaagaagacccaggatgaggtggctctgctgaaaagggagaag
gacagattggtgcagcagctcaaacagcagactcagaacagaatgaaactgatggcagac
aactatgaggatgaccatctgaagactgttcctgaccagacaaatcacaaaccctctcca
gatcagatgattccccctcttctagccctgtcccagaaccgcagtaaactcaagctctac
atcgcccacctgacagacctctgccatgaccgtgaccccagcatcctcagccagctcacg
ccgccctctcactaccaccacagcgaccccgaagactgggaggaggagctccagaagatg
agtgtcgaacagttggagcgagagctggagatgtgtgagaaggagagcggggagctgcag
gagtacgccaactctgttctccagcagatcgcagactactgccccgatatcctggagcag
gttgtcaatgccctggaggagtcgtgctga
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