Anoplopoma fimbria (sablefish): 129107875
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Entry
129107875 CDS
T09102
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129107875 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129107875 (slc24a1)
Transporters [BR:
afb02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
129107875 (slc24a1)
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
BUD22
PPP4R2
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
129107875
NCBI-ProteinID:
XP_054475444
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Position
19:complement(1019696..1025355)
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AA seq
738 aa
AA seq
DB search
MYCTRRKRLQLSRVLFLLSGVFLCILYQLTISARLHEPLPMPQIGGDFGEGSTEGVEEAT
EETQGVEEPLTATHELEPTDQTTPEMHVKHHSDTTSDFKALSPTESPLPPTTNRTIVRCI
YVAPEPPQEIPTPAPAPPLTTITPASPGEAPHIKGEYPEDIFSVDDRRRGWVILHIFGMM
YMFISLAIVCDEFFVPALGVITEKLAISEDVAGATFMAAGGSAPELFTSLIGVFIAHSNV
GIGTIVGSAVFNILFVIGMCALFSREVLHLTWWPLFRDVSFYIIGLILLIIFFLDNVIMW
WESMMLVACYTVYVIFMKFNVQIERTFKALLIKNKNIIRIIAVEEPEKKNGDAEDIARPA
PEDNNRLKLKPSLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEGKFKEKAEILNTVAKG
TAESKTQDKSEDGRGKTEPVKEPEAAPAPETEKTEQPENKKVVSNHVLVVIKKPRSQSLI
AVYEDLPAGDDGSEGSDSDEDDSDEDSDESSEEEEDDEEEDEDEGEKEEEQEDEPLSLEW
PDTPRKQATYLFLLPIIIPLWLTVPDVRNQKSRKFFAGTFLGSILWIAIFSYLMVWWAHQ
VGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVP
WLLYSSFHNFAPVAVSSNGLFCAIVLLFIMLLFVIISIASCKWKMNKLLGFTMFLLYFIF
VVLSVMLEDRIIICPVSI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtacaagaaggaagcgactgcagctgagccgggttttgtttctcctttccggg
gtttttctctgtatactctaccagctgaccatcagtgccagactgcatgagcctttgcca
atgcctcagattggaggggattttggagaaggttcaacagagggggttgaggaggctaca
gaagagactcagggtgtggaggaacctctcactgcaacacatgaattagagcccacggat
caaacaactccagagatgcatgtgaaacatcactcggatacaacttcagattttaaagca
ttgagccccactgaatctcctctaccaccaactacaaaccggactattgtgcgttgcatc
tatgtggcccccgagcctccacaggagatacccacaccagctccagctcctcctttgacc
accatcactccagcttctcctggtgaagctccacatataaagggtgaataccctgaagat
attttctctgttgatgaccgtagacgaggctgggtgatcctccatatttttgggatgatg
tacatgttcatttcacttgcaattgtgtgtgatgagttctttgttcctgcactgggagta
atcacggaaaagttagccatctctgaagatgtagcaggagccaccttcatggctgccgga
ggctctgctcctgagcttttcacatccttaataggagtattcatcgcccacagcaatgtg
ggtataggaacaatcgttggctcagcagttttcaacattttgtttgtgattggaatgtgt
gctttgttttcacgggaggtacttcatctaacctggtggccactttttagagatgtatcc
ttctacataattggcctcatcttactcatcatcttcttcttggataatgtcataatgtgg
tgggagagcatgatgctggtggcctgttacactgtctatgtgattttcatgaagttcaat
gtgcaaatagagcggaccttcaaggccctactcatcaaaaacaagaacattatcagaatt
attgctgtggaagaacctgaaaagaaaaatggggacgctgaagatattgcccgacctgct
ccagaggacaataatcggttaaagttgaagccatcccttcagcgaggaggaagctcagct
tctttacacaacagcaccatgagaaacaccatcttccaacttatgatccacacattagac
cctctaggtgaggggaaatttaaggaaaaggctgagattctgaatactgtggcaaaaggg
acggcagagagcaaaactcaagacaaaagtgaagatggacgaggtaaaactgagccagtc
aaagagccagaggctgccccagccccagaaacagagaagacggagcaaccagagaataag
aaggtagtctccaaccatgtcctggtggttatcaaaaagcccagaagtcagtctttgata
gctgtctatgaggatttgccagcaggagatgatgggtcagaaggctccgacagtgatgaa
gatgacagcgatgaagacagcgatgagtccagtgaagaagaagaagatgatgaggaggaa
gatgaagatgagggggagaaagaagaggagcaagaggatgaacctctgtctttagagtgg
cctgacacgccacgtaaacaagccacctacctcttcctgctgcccataatcatccctctg
tggctcacagttccagatgttcgcaaccagaaatccagaaaattctttgcgggcaccttc
ctgggctccattctgtggattgctattttctcctacctcatggtgtggtgggcccatcag
gtgggtgagaccattggcatctcagaggagattatgggcctgactatcctggctgcaggg
acatccatccctgacctcattaccagtgtgatagtggcgcgtaaaggcctgggggacatg
gctgtgtccagctctgtggggagtaacatcttcgacatcacagtgggcctcccagtgccg
tggctcctgtactcatccttccacaattttgctccagtggctgtcagcagcaatgggctc
ttctgtgccatcgtgctgctctttatcatgctcctcttcgtcattatctccattgcatcc
tgtaagtggaagatgaataagctgctgggtttcaccatgttcctgctctactttatattt
gtggtgcttagcgtgatgctggaggatcgcatcattatctgccctgtttccatctga
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