KEGG   Anoplopoma fimbria (sablefish): 129107887
Entry
129107887         CDS       T09102                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129107887
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:afb01009]
    129107887
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afb03021]
    129107887
Protein phosphatases and associated proteins [BR:afb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129107887
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     129107887
    Little elongation complex (LEC)
     129107887
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 129107887
NCBI-ProteinID: XP_054475466
LinkDB
Position
19:2400116..2426729
AA seq 599 aa
MAALRQERRYGLSCGQINKNNPKQTLYHVKLTDTAIRTLEAYQNLKASLSNQPAICFKGS
QGYVKIPAPTPESPDGFRVFSFYLSSDSKDKPQSSFDCIHQYVSGDGRDHLEGQGSIQDK
ITVCATDDSYQTTRERMSQVEKDIWSRSAIEIKPGPSKYLKVQRKQGLVSGSDSSNKHSP
SNKRSLVPSPVAHRLLRDRIIHLLALKPYRKPELLLWLERERASPKDKADLTSVLDEVGK
LNPKDHSYSLKDELYKHVQREWPGYLEEEKQLINRLLIRKLQPLHSSQLKSPQSNHSFLK
TPGDSPSHLSPAKNLSVKRPLPSDPSNFQTPKKQRLLDQCLPLHSPSHGDYGTNGARSSS
SHGNSRVQIKLDFDKTNNHLQGSPNSLYSPHKLSGSSTIPKLERTEPAPAAPSPKPPHTD
TSVCTDQQFTIGQHKKKRSKKHKDKERERLKPDWIETSPDLKQSREILKEHEREKTPVNQ
TSAEELPDYLIKYSTITALEQRQEYKDDFCAEYDEYRALHDRIGAITEMFVQLGSKINTL
SPGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLITDYDQAQGLS
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcagctctgagacaggagcgtcggtatgggctctcctgtggccaaatcaacaaaaac
aacccgaagcagactctgtatcacgtcaaactcactgacactgccatccggaccctggaa
gcctaccagaacctgaaggcatcactatcaaatcagccagcgatttgcttcaaggggagc
caggggtacgttaagatcccagcgccaacacctgaatctcctgatggattcagagtcttc
tcgttctatctttccagtgacagcaaagacaagcctcagtccagctttgactgcattcac
cagtatgtctcaggggatggcagggatcacctggagggccagggcagcattcaggacaag
atcacagtttgtgccacagatgactcctaccagacaacccgggagcgcatgtctcaagtg
gagaaggacatctggagccgctcagcaattgagataaagccggggccaagtaagtactta
aaggtccagaggaagcagggtctggtatcaggctcagatagcagcaacaagcactccccg
agcaataagaggagcctggttcccagccctgtggcacaccggctcttgagggatcgcatc
atccatctcctggccttaaagccctacaggaaacctgagctgctactgtggttggaaagg
gagcgagccagtccaaaggacaaggctgacctgacctcagtactggatgaggttggtaaa
ctgaaccctaaagaccacagctactctctaaaggatgagctctacaaacacgtccagaga
gaatggcctggatatctagaggaggagaagcaactcatcaataggctcctgatcaggaaa
cttcagccactccacagtagccagttgaagagtccccagtccaaccattcattcctcaaa
actcccggggactctccttcacatctcagtcctgccaagaatctctctgtgaaacggcca
ttgccctctgacccatccaactttcagacccccaaaaaacaaagactattagaccagtgt
ttgcctctgcactcgccgtctcatggagactatggcaccaacggggctcgtagctcctct
agtcatggaaactctagagtacagatcaaactggatttcgacaaaaccaacaatcatctc
caggggagtcctaacagtctgtactcgccgcacaaactcagcgggtcatctactatcccc
aaactggagaggacagagccagctcctgctgcacccagccctaagcccccacacactgac
acgtccgtttgcactgaccaacaattcaccattggccaacataaaaagaagaggtccaaa
aagcacaaagacaaagaacgagagcgcttaaaaccagactggattgagacgagtccagac
ctgaagcagagccgagaaattcttaaagaacatgaaagagagaagacacctgtcaatcaa
acctcagcagaggaactgcccgactatttaataaaatacagcaccataacagcactggag
cagcgccaagagtataaagacgacttctgcgcagagtacgatgaatacagagctcttcat
gatcggattggggccatcacagagatgtttgttcagttgggctcaaagatcaacactctc
tccccaggaacacaagagtacaagcttatggaggaccaaatactacaaaagtaccgaaag
tataagaaaaagtttcctggttatcgggaagagaagaagcgatgcgagtacctccatcag
aaactgtcgcatatcaaaggcctgatcacagattatgaccaagcacagggactctcctag

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