Anoplopoma fimbria (sablefish): 129107902
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Entry
129107902 CDS
T09102
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129107902
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Cadherin related
129107902
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Hva1_TUDOR
Motif
Other DBs
NCBI-GeneID:
129107902
NCBI-ProteinID:
XP_054475487
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Position
19:3655253..3662558
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AA seq
890 aa
AA seq
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MALIKLKRSLFQAKALVCSLLVLLCLHTATGMSGWGGCLDGQDVFTTIRENSHSGEVVAE
LVAETTMEGVHWSLDGKDADWFFLDERSIRLNTTADKVLDREAQGPVLMAELSCYEDDAL
QSVYRIMVEILNENDNLPVFAEDTVQSLNISELTPVNSVVFTVRATDADNDKIIYSIDQA
SPDAEYFKVELPNSGEVILSKPLDYETKTILTVTIHASVSFEMSTAERFNTSTNITINIL
DGDDQYPQFMPCHLLFQDETSRICTNPVYTVNVTEGEEDIVLDFSPGPIHAVDGDRGLSS
PLSYSILSGDNDGHFLMDRETGEVKLIRGIEDKLTTPELHLQVMAYQVDDPRKYSVAAVL
VRVLAVNQFYPEFDMAKYQGFVTAGKSDASLVNTYGSKALMLYVQDQDFIHGLNPMIHFN
FSPTSNHTEYYQLTQEGLLIARTNQLKPNQKHVLEVTAIDQETGDATFATVVVEVLSEGQ
SIPNSPLGDANPISCTLGKALLLSMVFMTVLGCILFVVMWLKKKHKGKRNPLQRGFVAQG
KHPNVSLRWFQLASHRSAMPHTVEVPSNNEEHGTCNPSFSFPDNPGANTHQDLPSCRGPV
PPRTAAAPDTSFIPSETVLSPVIINDNVSTPIKCSSCSPTLHRATEDVIPTCMAPPREKP
GSPTYLDSTEALPITSPSPESTSSPPFTCPDSQTTETTTNDDPADPVTSPSSQCSIPWSH
TRIASAEIDKPFRKPRVKTPPYSPLLSSPLTKQPGTPPLTPEHAPLEAKLVDIDSSPLDT
PPVPPELTSMTLSTEVDQPSTSLDQIEQSEQPGGAADAGSPSQDRRPSTNSGNPQGSRGA
GDVDDAGFLGDEDADKNTEDDDDDDELASDEEELLRVMARCNPIFITFNK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggccctcattaaactgaaaaggagtttatttcaggccaaagctctagtctgctcactg
ctggtcctcctgtgtctgcacacagccacaggaatgtcagggtggggtggatgtttggat
ggtcaggatgtattcacaacgatcagagaaaacagccattcgggagaagttgttgctgaa
ctcgtggctgaaaccacaatggagggggttcactggagcctggatggaaaagatgccgat
tggttcttcttggatgaaagaagcatccggctgaacacaacagctgacaaggtcctcgac
cgagaggctcagggtcctgtcctaatggctgagttatcatgttatgaggacgacgcactt
cagagtgtgtacaggatcatggtggagattctcaatgagaacgacaatttgcctgtgttt
gcagaagacacggtccagtctcttaacatcagtgagctaactccagtgaactctgtggtg
tttactgtccgggccacagatgcagataatgacaagatcatttactccattgaccaggca
tcaccggatgcagagtacttcaaggttgaactccccaacagtggagaggtgatcctgtcc
aagcctctagactatgagaccaaaaccatccttactgtcaccatccatgcatcggtaagc
tttgaaatgagcactgcagagcgcttcaataccagcaccaacatcaccatcaacatcctg
gatggagatgaccagtaccctcagttcatgccctgccacctgctattccaggatgagacc
agtcgcatctgcaccaacccggtgtacacagtcaatgtcacagagggggaagaggacatt
gtgttggacttctcacctggtcccattcatgcagtggatggagacagaggacttagctct
ccactcagctattccattctctcaggagacaacgatgggcatttcctgatggacagagaa
acgggggaggtgaaactgattcgtggcattgaagacaaactcacaactccagagctgcat
ctacaggtcatggcatatcaggtcgacgaccccaggaagtattctgttgctgcagtgttg
gtccgagttctggcagtgaaccagttttatccagagtttgacatggctaaatatcaaggc
tttgtaactgctggaaagagcgatgcctctctggtcaatacttatggcagtaaagcactg
atgctatatgtacaagatcaagactttatccatggcttaaatccaatgatccacttcaac
ttcagtcctacatccaatcacacagaatactatcaactcacgcaggagggtcttctgatc
gccaggaccaatcaactcaaaccaaaccagaaacacgttctagaggtaactgctatagac
caggagacgggagatgccacctttgctactgtagtggtggaggtgttatctgaaggacaa
tcaatccctaatagtccattgggagatgcgaatccgataagctgcactttgggcaaagcg
ctgcttctgagcatggtgttcatgactgtactgggatgtatcctgtttgtggtgatgtgg
ctgaagaagaaacacaagggaaagcggaacccactgcaaagaggctttgtggctcaaggc
aaacaccccaatgtgagcttacggtggttccaactggcgagtcaccgtagcgccatgcca
cacacggtggaagtaccctccaacaatgaagaacatggaacctgcaacccttccttcagc
ttcccagacaatcctggcgctaacacccaccaagacctcccctcatgccgaggacctgtc
ccacccagaacagctgctgcacccgacaccagcttcatccccagtgaaactgtgctcagc
cctgtgatcatcaatgataatgtttcgacaccaataaaatgctcctcttgttcacccacc
ttacaccgagccaccgaggatgtgatccccacatgtatggctccacccagagaaaagcct
ggctcaccaacatatcttgactctaccgaggcactacctatcaccagtcctagtcctgaa
tccactagctctccaccgttcacctgtccggattcacaaacaacagaaacaaccaccaac
gatgaccctgccgaccctgtcaccagcccctcctcccaatgcagtattccatggagtcat
acccgaattgcttcagcagaaatagacaaacctttccgcaaacctcgtgtgaagacaccc
ccgtattcacctttactgtcctcacccctcaccaagcagccgggcacccccccactcacc
cctgagcatgcacctttagaagccaagcttgtagacatagattcatctccccttgataca
cctcctgtaccaccagagctaacatccatgactctaagcacagaggtagaccaaccttcc
acatcactggaccagatagagcaatcagaacaacccggtggggctgcagacgccggcagt
ccgtctcaggacaggaggccctcgacaaactctggaaacccgcagggcagccgtggggca
ggagatgtcgatgacgctggttttctgggagacgaagatgcagacaagaacactgaggat
gatgatgatgatgatgagttagcgtcagacgaagaagagctgctgagagtgatggctcgt
tgtaatcccatttttatcacatttaataagtga
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