Anoplopoma fimbria (sablefish): 129107990
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Entry
129107990 CDS
T09102
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129107990
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129107990
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129107990
Protein kinases [BR:
afb01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
129107990
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129107990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_2
PML_CC
USP7_ICP0_bdg
PRANC
Motif
Other DBs
NCBI-GeneID:
129107990
NCBI-ProteinID:
XP_054475585
LinkDB
All DBs
Position
19:complement(21680426..21690782)
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AA seq
971 aa
AA seq
DB search
ADADAAFVVENEAESKQAREEKSVSTGQNHLDTCPVCRLNFHSREPKLLPCLHSFCKKCL
PSPSRNLAMVEPPNSRADSATKPLNVMRCPVCRQECMEVDVMENVFVKDSVEAPSSTVER
TVQLCMTCDDNTQAVGFCVDCVEYLCVTCVEAHQRVKFTKDHTIRQKAEVSQEVQGVSAQ
RPMFCDIHKQEPLKLFCETCDLLTCRDCQLVKHKDHNYQFLEDAYKSHKQHMESMTHQLQ
EKRKLIEEVSNSINKGLLQVDQNRTSVHNEIKKSICSLILEINKKGKMLVNQLEAVTKDH
ESVLRKQHEDIGYLSRHLDHVINFTKWATARSGGSALLYCKRLILFQIGNLLRAKCSTSF
IPQSTVRFQSRSSYWASNVDLGSLVVEGVPGHQLGGFQGIPHQLSHPGNGPSGSPHSFAL
GGPHNTLAQLQMQVDKLNPQANWQPQPPPPPWTWYQSVRLQRTVPGPLQGGGSPSQSMPH
QPGRRFMAPPPNHVSPTSSLPSPGFTPQPLRGMGSSSTYQPKAMDVFSSSPLYTHVAPMP
INGGVSLPQSQQTIEPTYLNRRNDPGGPVYVLKPNYPQSLQPSLLHRNVQGQQNSLGYAA
VSPEEKPGTVTWKPPEAQRPGGAVGSGVKRRRRSSPGPIIVIKDEPDDDSSYVQANQRAS
LPDSTGDQPQISARCEGNKVPTPLQSTDDKPQSPSQPPHSPPDQSKTNAPDHTGSLGEEQ
QVDQHHAPLEDPHEGPCAACRTGGELLCCNKCPRVFHLSCHVPTLLKSPSGEWFCSLCRD
LLVPEMEYDCKSKAEAKTVKKEPDSEGGFSPVDKRKCEKLLLHLFCSGLSSAFQGPASPS
VCANNRLAIKGPLNLSAVKKRLEAKQSPSYQSPAGFVSDIRLVFGICTALSEVDTEVTMA
GRTLKEQFEEHLGVMFPDQSFPEIKLEMIPTSPPDSQLLSLDNTSQHAKRQRTCSDSQDT
PIRPSGEDGVV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gctgatgctgatgctgccttcgtcgtggagaacgaagccgagagcaagcaggctcgagag
gaaaagtccgtgtccaccggccagaatcacctggacacgtgccccgtctgccgtctgaac
tttcacagtcgcgagcccaaacttctgccgtgtcttcactccttttgcaagaaatgtctg
ccctccccctccaggaatctggccatggtagagccgccgaactcaagggctgacagcgcg
accaaaccactgaatgtgatgcgctgcccggtgtgcaggcaggagtgtatggaggtggat
gtgatggagaacgtctttgtgaaggactcagttgaggctcccagcagcacagtggagagg
acagtccagctctgtatgacctgtgatgacaacacccaagcggtggggttttgcgtggac
tgtgttgagtacctctgtgtcacctgtgtggaggctcaccagagggtcaagtttaccaaa
gaccacaccatcagacagaaggcagaagtctcacaagaggtccaaggtgtgtcggctcag
aggccgatgttctgtgacatccacaaacaagagccgctgaagctgttctgtgagacctgt
gacctgctgacctgccgtgactgccaactagtaaagcacaaggaccacaattaccagttc
cttgaagatgcctataaaagccacaaacagcacatggagagcatgacccatcagctgcag
gagaaaaggaaactgattgaagaggtatcaaactccataaacaaaggacttcttcaggtt
gatcagaaccgaacgtctgttcataatgaaataaagaaatccatctgcagtttgattctc
gagataaacaagaagggcaagatgctagttaatcaacttgaggctgtaacgaaggatcac
gagagtgtcctgcgaaaacaacatgaggacatcggctatctatccagacacctggaccac
gtcatcaacttcaccaaatgggccacagccaggagcggcggctcggccctcttgtactgt
aaacgtttgattctgtttcagattggaaacctcctgcgggcaaaatgtagtacctcgttt
ataccacagagcactgtacgcttccagagtcgatcctcttattgggcctcaaatgttgat
ctgggctctttagtggtggagggtgtaccaggccatcagctgggtggttttcagggtatc
ccacatcagctctcccaccctgggaatggcccctcaggctcgccccacagctttgccctg
ggaggcccccataacactctggctcagctccaaatgcaggtggacaagctaaacccgcag
gccaactggcagccccaaccgcctcctccgccctggacgtggtaccagagtgtccgacta
cagcggaccgtcccggggcccctgcaaggaggaggctctccatcccagagtatgcctcac
caaccaggtcgcaggtttatggcgcctcctcccaaccacgtcagcccaactagcagctta
ccgagccccgggtttacgccacagcctctgagggggatgggcagcagctccacctaccaa
cccaaagccatggacgtgttttcctcttcacctctgtacacacatgtagcaccaatgccc
atcaatggtggcgtcagtttgcctcaatcgcaacagacgattgagcccacatatctgaac
aggaggaatgatccaggtggtccggtatatgtgctgaaaccaaactatccccagagcctg
caaccttctttgctacacagaaatgtgcaaggacagcagaattcactcggctacgctgct
gtatccccagaggagaaacccgggaccgttacctggaaacctccagaagcacagcggcct
ggtggagcagtgggctcgggtgtcaagagaagacgaagatcgtcaccagggcccatcatc
gtcatcaaagatgagccggacgacgacagtagctacgtacaagccaaccaaagagccagc
ctccccgacagcacaggtgaccaaccccaaatcagtgcccgctgtgaggggaacaaagtc
ccgactccccttcaaagcacagacgacaaaccccaaagcccctcacagccccctcacagc
ccaccggaccagagtaagactaatgctccggatcacaccggctcactgggagaagaacag
caggtagaccagcaccacgctccgctggaagaccctcatgaaggcccgtgtgctgcgtgt
cggactgggggagagctgctgtgctgcaataagtgtcccagggtttttcacctttcgtgc
catgttccaactctcctcaaatctcccagtggcgaatggttttgctctctctgccgcgac
ctgttagtgcctgagatggagtacgactgcaaaagcaaagctgaagccaaaacagtaaag
aaggagccagattctgagggaggattttctcctgtggacaaacgaaagtgcgagaagctg
ttgctgcacttgttttgcagcggactgagttcagccttccaagggcccgcatccccctcg
gtatgtgctaataacaggctcgctataaaggggccgctgaatctttccgctgtgaaaaaa
cgattggaggctaagcagagtccgagctaccaaagccctgcagggtttgtatcagacatc
aggctcgtatttgggatctgcacagccctcagcgaggtcgacacggaggtcaccatggcg
ggcaggacccttaaagagcagtttgaagagcacctgggtgtcatgttccctgaccagagc
tttccagaaatcaaactggagatgattcccacttcccctcctgactctcagctcttgtcc
cttgacaatacatcccaacatgcaaagcgccagcgcacatgttcagactcccaggataca
ccgatccgtcccagtggagaggacggagtagtgtga
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