Anoplopoma fimbria (sablefish): 129108114
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Entry
129108114 CDS
T09102
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129108114 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129108114 (rbm28)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129108114 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129108114
NCBI-ProteinID:
XP_054475753
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All DBs
Position
19:complement(4282538..4290169)
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AA seq
792 aa
AA seq
DB search
MEPRATEPKAKEPRAMPARTLFVNSLPASATNARLEEIFSEIGPVKQCFVVTEKGTVKCR
GFGFVTYAMEEDAQRAVKEVKQYDGKKVSVTVAKKKITDKRKAATTEPAAAPTENEQKAK
GFRKTNLKSRLIIRNLSFKCSEDDLTQLFSEFGKVLEAKIPLKPDGKMRGFAFVLFKNLS
EAGKALNAMNLKEIKGRQVAIDWAVPKDKFIATQLSSSAGNKITEATTKESDTKGDTEDE
DEEKPQAPPEKKRVHSKPSLPQVEESQSDDDDDDGEEQDSEEEEEQEEEEDDEDEEEDEK
EVDDVSQEEDDGSDDDKSSLDSNDDEDEDEEEDEDQEEDESAKKKAPKKLLPSDVKEGRT
IFIRNLSFDTEEEGLEEVLLKYGELNYIKVVIHADTGHSKGCSFAQFKTKEAADKCLAAA
QDEAENGGIRLDGRKLLIVAAVSREDASKLKVDKVKVETGTRNLYLAREGLIRAGTKAAE
GVPEADMTKRTRFEEVKRAKLRGLNVFVSKNRLCVHNLPKSVDNKKLKALCLQAVKGGKG
VRITECRVMYDKKPEKGQVTGQSLGYGFVQFQAHEHALSTLRYLNNNPDIFGSHKRPIVE
FSLEDSRKLKIKELREQKYKERNVAFKKGTKPQPETAEDGKGPRKAVNKAQSSSEQTQNN
ERAPVDSQKEGGRYLGFQTKPEVEHVDLQNGKKRKKVLTFPTHRGPKIRLRDKGKQQAPP
PKKPKPGSNRKDRQRQQMEKPTQRSNQVKPTKKNFKRKGGDRFDSLVEQYKKKLMDNSYK
STNVKRNKWFDS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggagccgagagccacggagccgaaagccaaggagccgagagccatgcctgcacggacc
ctgttcgttaactccctgccggcttcagctacaaacgcacggctggaggaaatattctca
gaaatcggtccggtcaagcaatgcttcgtggtcacagagaaaggcacagtaaaatgtcgg
ggatttggctttgtcacatatgccatggaggaagatgcacagcgagcagtgaaagaagtc
aagcaatacgacggaaagaaggtttctgtaacagtagcgaagaagaaaatcacagacaaa
cggaaagcagcaactacagagccagctgcagcaccaacagaaaatgagcagaaagccaaa
ggcttcaggaaaaccaatctgaaatctcgactcatcataaggaacctgagttttaagtgc
tcagaagatgacctgacacaacttttttccgagtttggaaaagttcttgaggccaaaatt
cccctcaaaccagatgggaagatgcgcggatttgcctttgtcctttttaaaaatttgtct
gaggcagggaaagcgcttaatgccatgaacctgaaggagataaaaggtcgacaggtagca
attgactgggccgtgcctaaggacaagtttatcgccacgcaattgtcatcaagtgcagga
aataagattacagaagcaactacaaaagagtccgacaccaagggtgacactgaagacgaa
gacgaagaaaagccacaagcaccacccgagaagaaacgagtccattccaaaccatctctg
ccacaggtggaagaatcccaatcagatgatgatgatgatgatggcgaggaacaagacagt
gaggaggaggaagaacaggaggaggaggaggatgatgaagatgaagaagaagacgagaaa
gaggttgatgatgtgtcccaggaagaggacgacggcagtgacgatgataagagcagcctt
gattcaaatgatgatgaagatgaggatgaagaggaagatgaggaccaagaagaagatgaa
tcagctaaaaagaaagccccaaagaaacttctcccttcagatgtgaaagagggcagaaca
attttcatcaggaacctttcctttgatacagaggaagaaggtcttgaggaagtcctgcta
aagtatggagagctaaactacattaaggttgttatccacgcagacacaggacattcaaaa
ggttgttcctttgctcagttcaagactaaagaggctgcagataaatgcttagcagcagca
caggatgaggcagagaacggaggcatccgtctcgatggcagaaagctgttgattgtggcg
gcagtgagcagagaggatgcttccaagctgaaagtggacaaggtgaaagtggaaactggc
accaggaacctgtatctggccagagagggattgatccgtgctggaaccaaagctgcagag
ggtgtacctgaagcagacatgaccaaaagaaccagatttgaagaagtaaagagggccaag
cttcggggcttaaatgtgtttgtgtcgaagaatcgtctgtgtgtccataacctgcccaag
tcggtggacaataaaaaactcaaagcactctgcctccaagcagtaaaaggaggcaaggga
gtccgcatcacagagtgccgggtgatgtatgacaagaaaccagagaagggtcaggtgacg
ggacaatcattaggttatggctttgtccagttccaggcccatgaacatgctctcagcaca
cttcgttaccttaacaacaaccctgacatctttggttcacacaagagacctatcgttgag
ttctcactggaggattcaaggaaactgaaaataaaagaattgcgagaacaaaaatacaag
gaaaggaatgtggcttttaaaaaaggaacaaaacctcagcccgagacagccgaagatgga
aaaggacccaggaaagctgtaaataaagcacaatcctcatcagagcagacacaaaacaac
gaaagagctcccgtcgatagccagaaggaaggcggacgctatttaggcttccagaccaag
cctgaggtcgagcacgtagatttgcagaacggaaagaaacgaaagaaggttctaaccttc
cccacccatcgggggcctaagatcagattgcgtgacaaaggaaagcagcaggctccgcca
cccaagaaaccaaagcctggatccaacaggaaggaccgtcaaagacaacagatggaaaag
cccacacagcgcagcaaccaggttaaacccacaaagaagaatttcaagagaaagggtggg
gaccgttttgacagcctggtggagcagtacaagaagaaactgatggataacagttacaag
agcaccaatgtcaaaagaaacaagtggtttgatagttaa
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