KEGG   Anoplopoma fimbria (sablefish): 129108114
Entry
129108114         CDS       T09102                                 
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
  KO
K14573  nucleolar protein 4
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    129108114 (rbm28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:afb03009]
    129108114 (rbm28)
Ribosome biogenesis [BR:afb03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    129108114 (rbm28)
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 129108114
NCBI-ProteinID: XP_054475753
LinkDB
Position
19:complement(4282538..4290169)
AA seq 792 aa
MEPRATEPKAKEPRAMPARTLFVNSLPASATNARLEEIFSEIGPVKQCFVVTEKGTVKCR
GFGFVTYAMEEDAQRAVKEVKQYDGKKVSVTVAKKKITDKRKAATTEPAAAPTENEQKAK
GFRKTNLKSRLIIRNLSFKCSEDDLTQLFSEFGKVLEAKIPLKPDGKMRGFAFVLFKNLS
EAGKALNAMNLKEIKGRQVAIDWAVPKDKFIATQLSSSAGNKITEATTKESDTKGDTEDE
DEEKPQAPPEKKRVHSKPSLPQVEESQSDDDDDDGEEQDSEEEEEQEEEEDDEDEEEDEK
EVDDVSQEEDDGSDDDKSSLDSNDDEDEDEEEDEDQEEDESAKKKAPKKLLPSDVKEGRT
IFIRNLSFDTEEEGLEEVLLKYGELNYIKVVIHADTGHSKGCSFAQFKTKEAADKCLAAA
QDEAENGGIRLDGRKLLIVAAVSREDASKLKVDKVKVETGTRNLYLAREGLIRAGTKAAE
GVPEADMTKRTRFEEVKRAKLRGLNVFVSKNRLCVHNLPKSVDNKKLKALCLQAVKGGKG
VRITECRVMYDKKPEKGQVTGQSLGYGFVQFQAHEHALSTLRYLNNNPDIFGSHKRPIVE
FSLEDSRKLKIKELREQKYKERNVAFKKGTKPQPETAEDGKGPRKAVNKAQSSSEQTQNN
ERAPVDSQKEGGRYLGFQTKPEVEHVDLQNGKKRKKVLTFPTHRGPKIRLRDKGKQQAPP
PKKPKPGSNRKDRQRQQMEKPTQRSNQVKPTKKNFKRKGGDRFDSLVEQYKKKLMDNSYK
STNVKRNKWFDS
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggagccgagagccacggagccgaaagccaaggagccgagagccatgcctgcacggacc
ctgttcgttaactccctgccggcttcagctacaaacgcacggctggaggaaatattctca
gaaatcggtccggtcaagcaatgcttcgtggtcacagagaaaggcacagtaaaatgtcgg
ggatttggctttgtcacatatgccatggaggaagatgcacagcgagcagtgaaagaagtc
aagcaatacgacggaaagaaggtttctgtaacagtagcgaagaagaaaatcacagacaaa
cggaaagcagcaactacagagccagctgcagcaccaacagaaaatgagcagaaagccaaa
ggcttcaggaaaaccaatctgaaatctcgactcatcataaggaacctgagttttaagtgc
tcagaagatgacctgacacaacttttttccgagtttggaaaagttcttgaggccaaaatt
cccctcaaaccagatgggaagatgcgcggatttgcctttgtcctttttaaaaatttgtct
gaggcagggaaagcgcttaatgccatgaacctgaaggagataaaaggtcgacaggtagca
attgactgggccgtgcctaaggacaagtttatcgccacgcaattgtcatcaagtgcagga
aataagattacagaagcaactacaaaagagtccgacaccaagggtgacactgaagacgaa
gacgaagaaaagccacaagcaccacccgagaagaaacgagtccattccaaaccatctctg
ccacaggtggaagaatcccaatcagatgatgatgatgatgatggcgaggaacaagacagt
gaggaggaggaagaacaggaggaggaggaggatgatgaagatgaagaagaagacgagaaa
gaggttgatgatgtgtcccaggaagaggacgacggcagtgacgatgataagagcagcctt
gattcaaatgatgatgaagatgaggatgaagaggaagatgaggaccaagaagaagatgaa
tcagctaaaaagaaagccccaaagaaacttctcccttcagatgtgaaagagggcagaaca
attttcatcaggaacctttcctttgatacagaggaagaaggtcttgaggaagtcctgcta
aagtatggagagctaaactacattaaggttgttatccacgcagacacaggacattcaaaa
ggttgttcctttgctcagttcaagactaaagaggctgcagataaatgcttagcagcagca
caggatgaggcagagaacggaggcatccgtctcgatggcagaaagctgttgattgtggcg
gcagtgagcagagaggatgcttccaagctgaaagtggacaaggtgaaagtggaaactggc
accaggaacctgtatctggccagagagggattgatccgtgctggaaccaaagctgcagag
ggtgtacctgaagcagacatgaccaaaagaaccagatttgaagaagtaaagagggccaag
cttcggggcttaaatgtgtttgtgtcgaagaatcgtctgtgtgtccataacctgcccaag
tcggtggacaataaaaaactcaaagcactctgcctccaagcagtaaaaggaggcaaggga
gtccgcatcacagagtgccgggtgatgtatgacaagaaaccagagaagggtcaggtgacg
ggacaatcattaggttatggctttgtccagttccaggcccatgaacatgctctcagcaca
cttcgttaccttaacaacaaccctgacatctttggttcacacaagagacctatcgttgag
ttctcactggaggattcaaggaaactgaaaataaaagaattgcgagaacaaaaatacaag
gaaaggaatgtggcttttaaaaaaggaacaaaacctcagcccgagacagccgaagatgga
aaaggacccaggaaagctgtaaataaagcacaatcctcatcagagcagacacaaaacaac
gaaagagctcccgtcgatagccagaaggaaggcggacgctatttaggcttccagaccaag
cctgaggtcgagcacgtagatttgcagaacggaaagaaacgaaagaaggttctaaccttc
cccacccatcgggggcctaagatcagattgcgtgacaaaggaaagcagcaggctccgcca
cccaagaaaccaaagcctggatccaacaggaaggaccgtcaaagacaacagatggaaaag
cccacacagcgcagcaaccaggttaaacccacaaagaagaatttcaagagaaagggtggg
gaccgttttgacagcctggtggagcagtacaagaagaaactgatggataacagttacaag
agcaccaatgtcaaaagaaacaagtggtttgatagttaa

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