KEGG   Anoplopoma fimbria (sablefish): 129108184
Entry
129108184         CDS       T09102                                 
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
  KO
K12327  caldesmon
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    129108184 (lsp1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:afb04812]
    129108184 (lsp1a)
Cytoskeleton proteins [BR:afb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     129108184 (lsp1a)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 129108184
NCBI-ProteinID: XP_054475861
LinkDB
Position
19:complement(27808760..27837315)
AA seq 546 aa
MSNALLKRNSSKQGLQNLMRLTAQRSVEDAEEVERERRRRAREAPSWSNGGSLPGESSPE
DGTPAEDSMFDCELKPSSSLALEEDEGFSDWTQRRERRRQQRLQELSQGGEEDEDEEEDT
VNKAVTVKTVKASVTSSGRLQRQEHLREDGAGVEMERRKEREEEAIRAERVRREEEREEE
EDKRKREEVKNRRKEEIQRPITEVEKRKEVKISYTSKVFVSQEPKQSNANGDATREEVMS
YKNKSKRSTSRAVEPEEADTILETEQRLEKIRQSLQQKESKELEQLRHRQVEAEQELEEL
KRKREERRQARAEEERRREEEEHQRLAKEEEERRRMKEDMERRRMEAAERMKSLSTSSVD
GDEAFTPFSPITPTHKISERTESLNRSLKKSNSFKKTQTLVLLPKIDDKLEQYAHAVENS
QEVRAVKASLTDLPSSPEVVISKKNLFEAGEAWSQSPTKGATCKDAEGLNVGVANRITQW
VKGSSDGGRQVPGKPADVRSGDVMQKKNMWEVIGDSTGQPGQKAKSSAAGKQYRFVVTGH
GKYEKK
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtccaacgctctgctgaagagaaactccagcaaacagggtttacagaacctgatgagg
ctgacggctcagaggagtgtggaggacgccgaggaggtggagagggagcgacgccggaga
gctcgggaggcgccgagctggtctaacggcggctcgctgcccggagagtcgtcaccggag
gacgggacgccggcagaggacagcatgttcgactgcgagctgaagccgagcagctctctg
gctctggaggaggacgagggcttcagcgactggactcagcgccgagagagacggaggcag
cagcgactgcaggagctcagccagggaggcgaggaggacgaggacgaagaggaggacacg
gtaaacaaagccgtcaccgtgaagaccgtcaaggcctccgtcacgtcctccggtcgactc
cagagacaggagcacctgagagaagacggagccggggtggagatggagaggaggaaggag
cgtgaggaggaggcgataagagctgagagggtgaggagggaggaagagagggaggaagag
gaggacaagaggaagagagaggaggtgaagaacaggaggaaggaggagattcaaaggccg
attacagaggtggagaaaagaaaagaggttaaaatctcctacacgtccaaggttttcgtt
tcccaagagccgaaacaaagcaacgccaatggagacgcaaccagagaggaagtgatgtca
tacaagaacaagtcaaaaaggtccaccagcagagcggtggagccggaggaggcggacacc
atcctggagacggagcagcgtctggagaagatccgtcagagcctccagcagaaggagagc
aaggagctggagcagctgagacaccgacaggtggaggccgagcaggagctggaggagctg
aagaggaagagggaggagaggcgtcaagcccgggcggaggaggagcgtcggagggaggag
gaggagcatcaacggctcgccaaagaggaggaggagaggaggcgcatgaaggaggacatg
gagaggaggaggatggaggcagcagagaggatgaagagcctcagtacctccagcgtggac
ggagacgaagctttcactcccttcagccccataactcccactcacaagatctcagagaga
accgagtctctgaaccgctccctgaagaagagtaacagcttcaagaagacgcagactctc
gtcctgctgccaaagatcgacgacaagctggagcagtacgcacacgctgtggagaattcc
caggaagtcagggcagtgaaggcatcgctgactgacctgcccagctcacctgaggtcgtc
atctccaagaaaaacctgtttgaggccggagaagcctggagccagagtcccaccaaggga
gccacctgcaaggacgctgaaggtttgaatgtgggcgtggccaaccgcatcacccagtgg
gtgaagggttcgtctgatggtggcagacaggtgcccggaaaaccagcagatgtgaggtcc
ggagatgtgatgcagaaaaagaacatgtgggaggttattggagactcgacaggtcagcct
ggacaaaaggccaagagctcagcagctggtaaacagtatagatttgtggtgactggtcac
ggaaaatatgagaaaaaatga

DBGET integrated database retrieval system