Anoplopoma fimbria (sablefish): 129108214
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Entry
129108214 CDS
T09102
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129108214 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129108214 (det1)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129108214 (det1)
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GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
129108214
NCBI-ProteinID:
XP_054475899
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Position
19:12673800..12683432
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AA seq
551 aa
AA seq
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MDDDTPTLKPRRIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAQDLLRGQEGETLVTANDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPPPYFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYTEAQAESQPGFPRLYTDKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRRLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVLAVFENTSDQLLELFENFCDLFRNATLHSQAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacacgccgaccctgaagcccagacggatccagaatcaaaacgtggttcat
cgtcttgagaggcgcaggatctgttcgggccgacccggagctcactggtacagagtacgg
tgcttccaccaaaatcttttccccaacttcactgtggtcaacgtggagaagcccccctgc
ttcctcaggaagttctcgccagatggacgctgttttattgccttctcttctgaccagact
tctctggagatatatgaatatcaaggctgccaagcggctcaggacctgctgagaggccaa
gagggagagactcttgtaacggccaatgaccagcgttccctcaacatcagaggccgcctg
tttgagcgcttcttctccttgctccacgtcaccaatgtggcctcgaacggagaacacctc
aaccgggagtgcagcctcttcacagacgactgccgctatgtcattgtcgggtcggctgtg
tacgtcccagaggagccgccgccttacttctttgaggtgtatcgcaacaacgaatctgtg
actcccaaccctcggtctcctctagaagactactccctccacattatcgacctccacact
ggcaggctttgtgacaccaggtccttcaagtgtgacaagatcatcctgtcccacaaccag
ggcctctacctctacaggaacatcttggctgtgctgtcggtccagcagcagaccatacat
gtgtttcaggtcactccagaaggaacatttctagatgtgaggacgattgggcggttctgt
tatgaggacgacctcctgactctttcagcagtttacactgaggcccaggctgagagtcag
ccgggcttcccccgcctttacactgacaaaaccatcaactccctcaaacacaggctgctg
gtctacctctggaggagggctgagcaggacggcagcgccaccgctaagaggagattcttc
cagttttttgatcagctgaggaggttgaggatgtggaagatgcagctgttggatgagcac
cacctcttcattaaatacaccagcgaagacgtggtcacactcagagtcaccgacccctcg
cagccgtcgttcttcgttgtgtacaacatggtgtccacggaggtgctggccgtctttgag
aacacctccgaccagctgctggagctttttgagaatttctgcgacctgttcagaaacgcc
acgctgcacagccaagccgtccagttcccctgctccgcttcatccaacaactatgcccgg
caggtccagagaagattcaaggacaccatagtgaacgccaaatacggcgggcacaccgag
gcggtgcgtcggctgctgggtcagctgcccatcagcgcccagtcctacagcagcagtcct
tacctcgacctctccctcttcagttatgatgacaagtgggtgtcagtaatggagaggccc
aagacctgcggagatcaccccatcaggttttacgcgcgggactccggcctgctgaagttc
aagatacaggccggccttctggggcgtccagttaatcatgccgtgcggcgcctggtcgcc
ttcacattccaccccttcgagcccttcgccatctctgtgcagcgcaccaacgccgagtac
gtggtcaacttccacatgaggcatgtctgcgcgtga
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