KEGG   Anoplopoma fimbria (sablefish): 129108214
Entry
129108214         CDS       T09102                                 
Symbol
det1
Name
(RefSeq) DET1 homolog
  KO
K10571  de-etiolated-1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129108214 (det1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129108214 (det1)
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     129108214 (det1)
SSDB
Motif
Pfam: Det1
Other DBs
NCBI-GeneID: 129108214
NCBI-ProteinID: XP_054475899
LinkDB
Position
19:12673800..12683432
AA seq 551 aa
MDDDTPTLKPRRIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAQDLLRGQEGETLVTANDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPPPYFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYTEAQAESQPGFPRLYTDKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRRLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVLAVFENTSDQLLELFENFCDLFRNATLHSQAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCA
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggatgacgacacgccgaccctgaagcccagacggatccagaatcaaaacgtggttcat
cgtcttgagaggcgcaggatctgttcgggccgacccggagctcactggtacagagtacgg
tgcttccaccaaaatcttttccccaacttcactgtggtcaacgtggagaagcccccctgc
ttcctcaggaagttctcgccagatggacgctgttttattgccttctcttctgaccagact
tctctggagatatatgaatatcaaggctgccaagcggctcaggacctgctgagaggccaa
gagggagagactcttgtaacggccaatgaccagcgttccctcaacatcagaggccgcctg
tttgagcgcttcttctccttgctccacgtcaccaatgtggcctcgaacggagaacacctc
aaccgggagtgcagcctcttcacagacgactgccgctatgtcattgtcgggtcggctgtg
tacgtcccagaggagccgccgccttacttctttgaggtgtatcgcaacaacgaatctgtg
actcccaaccctcggtctcctctagaagactactccctccacattatcgacctccacact
ggcaggctttgtgacaccaggtccttcaagtgtgacaagatcatcctgtcccacaaccag
ggcctctacctctacaggaacatcttggctgtgctgtcggtccagcagcagaccatacat
gtgtttcaggtcactccagaaggaacatttctagatgtgaggacgattgggcggttctgt
tatgaggacgacctcctgactctttcagcagtttacactgaggcccaggctgagagtcag
ccgggcttcccccgcctttacactgacaaaaccatcaactccctcaaacacaggctgctg
gtctacctctggaggagggctgagcaggacggcagcgccaccgctaagaggagattcttc
cagttttttgatcagctgaggaggttgaggatgtggaagatgcagctgttggatgagcac
cacctcttcattaaatacaccagcgaagacgtggtcacactcagagtcaccgacccctcg
cagccgtcgttcttcgttgtgtacaacatggtgtccacggaggtgctggccgtctttgag
aacacctccgaccagctgctggagctttttgagaatttctgcgacctgttcagaaacgcc
acgctgcacagccaagccgtccagttcccctgctccgcttcatccaacaactatgcccgg
caggtccagagaagattcaaggacaccatagtgaacgccaaatacggcgggcacaccgag
gcggtgcgtcggctgctgggtcagctgcccatcagcgcccagtcctacagcagcagtcct
tacctcgacctctccctcttcagttatgatgacaagtgggtgtcagtaatggagaggccc
aagacctgcggagatcaccccatcaggttttacgcgcgggactccggcctgctgaagttc
aagatacaggccggccttctggggcgtccagttaatcatgccgtgcggcgcctggtcgcc
ttcacattccaccccttcgagcccttcgccatctctgtgcagcgcaccaacgccgagtac
gtggtcaacttccacatgaggcatgtctgcgcgtga

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