KEGG   Anoplopoma fimbria (sablefish): 129108243
Entry
129108243         CDS       T09102                                 
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03250  Viral life cycle - HIV-1
afb03272  Virion - Hepatitis viruses
afb04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129108243 (tsg101a)
   03272 Virion - Hepatitis viruses
    129108243 (tsg101a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129108243 (tsg101a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129108243 (tsg101a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129108243 (tsg101a)
Membrane trafficking [BR:afb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    129108243 (tsg101a)
Exosome [BR:afb04147]
 Exosomal proteins
  Proteins found in most exosomes
   129108243 (tsg101a)
SSDB
Motif
Pfam: UEV Vps23_core HAUS1 DUF3450 Het-C CC_Bre1 FapA ANG-1 UQ_con Exonuc_VII_L Xpo1 TPR_IF140_C Prominin Spc7 EMP24_GP25L DUF6468 FlaC_arch DUF724 DUF5685 CCDC90-like CCDC138_cc APG6_N SlyX
Other DBs
NCBI-GeneID: 129108243
NCBI-ProteinID: XP_054475937
LinkDB
Position
19:7196660..7204450
AA seq 390 aa
MAVVNEGALKKMLKQYKYRDLTVREITNVISQYKDLKPLMDAYVFNDGSTRDLMSLTGTV
PVSYRCNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQAPYQAFQAAGPPNPSYMPGMPAVSPYSPTPN
PGGYPGYQYPGGNSYPATAGPAHYPTQTPVSTVGPNRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEEMVSRLDQEVSEVDRNIELLKRKDEELSE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggccgttgtcaacgaaggtgccctgaagaaaatgctaaagcaatacaaatacagagat
ctgactgttcgtgagataaccaatgtcatctcccagtacaaggacttgaagccactcatg
gatgcttatgtgtttaatgatggatccacaagagacctgatgagcctgacaggaacggtc
ccagtgagctacagatgcaatgtctacaacataccagtgtgtctgtggttgctggacaca
tatccctacaaccctcccatatgttttgtcaaacctaccagtgccatgatgatcaaaact
ggcaagcacatcgatgccaacggcaagatctacctgccttatctacatgagtggaagcat
cctcagtcagacctgtatggtctgattcaggtgatgattgtggtttttggagaggagcct
cctgtgttttctcgcccaacgacacaagccccctatcaagcgttccaagcagctggaccc
cctaacccctcctatatgcctggaatgcctgcagtctccccctatagcccaactcctaac
ccaggaggctatccaggataccaatacccagggggcaactcttacccagccactgctgga
cctgcacactaccccacccagactccagtttccacagtgggcccgaacagagatggcacc
attggcgaggacaccatccgtgcatctctgatatcggctgtgagcgacaagcttcgctgg
agaatgaaggaggagatggacagagctcaggcggagcttgacgccctgaagagaacagag
gaggatctgaagaaagggcatcagaaactggaggagatggtctcaagactggaccaggaa
gtgtctgaggttgacaggaatatcgagctgctgaagagaaaggacgaagagctcagtgag
gccttggagaagatggagaaccagtcagagaacaatgacattgacgacgtcatcgtgccc
acagctccgctgtacaaacagatcctgaacctatatgcagaagaaaacgcaattgaggac
actatcttctacctcggagaagcccttcgcaggggcgtcatagaccttgaggtttttctt
aagcatgttcgccttctgtccagaaagcagttccagcttcgtgccctcatgcagaaagcc
cgcaagactgccggtcttagtgacctctactga

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