Anoplopoma fimbria (sablefish): 129108296
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Entry
129108296 CDS
T09102
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04260
Cardiac muscle contraction
afb04261
Adrenergic signaling in cardiomyocytes
afb04814
Motor proteins
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129108296 (tpm1)
04820 Cytoskeleton in muscle cells
129108296 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
129108296 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
129108296 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129108296 (tpm1)
04147 Exosome [BR:
afb04147
]
129108296 (tpm1)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
129108296 (tpm1)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of microglial cells
129108296 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
PUMA_CC
CENP-F_leu_zip
DUF3450
Crescentin
Vps5
DUF745
EzrA
TMP_N
GAS
DUF1664
Motif
Other DBs
NCBI-GeneID:
129108296
NCBI-ProteinID:
XP_054476008
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All DBs
Position
19:1898198..1910347
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDRSKQLEDDIRELEKKLRISEDERDKV
FEEFQTAEEKLLTADEVATKAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELTEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEEKLSQAKEENLDMHQMLDQTLMELNNL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggctgagggagacaagaaggcagcagaggacagaagcaaacagttagag
gacgatataagagagttggaaaagaaattgcgtataagtgaagacgagagagataaagtg
tttgaggagttccaaactgctgaggaaaagctgctgactgctgatgaggtcgccaccaag
gctgagggagatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggcgactgccctgacaaagctggaggaggctgagaaggctgct
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggacgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatatgaggaggtggcccgtaagctggtcatcattgagggtgacctggagcgcacagag
gagcgtgctgagctgacagagggcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggacaaa
tacgaggaggagatcaaggtcctcaccgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagagaaactg
tcacaagctaaggaagagaacctcgatatgcaccagatgctggaccagactctaatggaa
ctgaataatttgtga
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