Anoplopoma fimbria (sablefish): 129108314
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Entry
129108314 CDS
T09102
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129108314 (cilp)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
129108314 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
Ig_2
CarboxypepD_reg
CarbopepD_reg_2
ig
V-set
Ig_5
Ig_4
Motif
Other DBs
NCBI-GeneID:
129108314
NCBI-ProteinID:
XP_054476052
LinkDB
All DBs
Position
2:complement(20578813..20585013)
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AA seq
1164 aa
AA seq
DB search
MSVRPLLLLTLGITTVIVVTAQESWRRDNKDSSPSVFHSDDNYEWTTWFNVDHPGGRGDY
EQLEAIRFYYRSRVCETPRAIEARTTEWVPARETGEMVHADPTVGFWCLNEEQGPERNCS
NYSVRFLCPKDTIVNIQANWGPWSDWDPCPALCGQVGVQLRTRHCQSRTMPCSGPKVEVI
ACSGPECPKTDCSQQCVMGKVNAECDACMCEEHILLGSVRGAGGLTAEGATILRSGKLLT
LTDHNGHFRIPGICPDGNTTLTVLLQGHATLSVVVPHSAERTSVLTVQLKRTEKLHVLGS
PESKARREGQTAAFCCKVAGTPQPDKYQWFHNNSLLEKQSDSTLVLKNLLPEQTGEYYCK
ASGPSGAIKTKPATLKVLGRDEHSCNPKPESHLIRLPHDCHQNSTDSFYYDVGKCPSSTC
SGQLDNGIRCKDKVTYCCGVKKMEKRQLTCQGYQLPTMVVTECGCQKCVDTKTIVHGRAV
AADNGEPMRFGHVFMNGVRISRTGYKGTFSIQVPPDTERLVLTFVDNMQKFVNTTKVLPF
NTKGGAVYHEIKLLRKKPPVTISPTETNTLELGEVEGQEAMVQIQIPPYAFYTEKGEVFT
GNVNASVTFLDPRDVSTAAAAQSDLNFVGDEGDTIPLRTYGMFSVDFRGEENNEPLNAGE
VKVFLDSAQVKMSEHLDTMKLWSLNPETGLWEEEGSLQVEKKRRGKREERTFLIGNMEIR
ERRLFNLDVPENRRCYVKVRTFRSERFMPSEQVEGVVVSLINMEPTAGYSSNPRAWGRFD
SVITGSNGACLPAFCDEQKADAYSAYVMANLGGEELEAVSSAPKLNPNLIGVPQPYLGKL
NYRRTDHEDPRLKTTAFSINVAKPSPNTAEESNGPVYTFENLKECEEASFSAAHFRFSRV
EGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYVKVKINSPHEINVRSRNMGGTH
PKTVGQLYGLRDSRSIRDMDQATISAVCLEFKCSGMLYDQERVDRTLVKVIPQGSCKRDQ
VNSILQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFD
GTSDGTSRVMKSNDGVALTFTCGDREVASQSVFQSLQSSQGQTVTSVVRGEGRQNRRRQR
ANAPRSNSRRSTRNPAGKRTKARS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaggcctcttcttcttctcaccctgggaatcaccacagtcattgttgttaca
gctcaagaatcatggagaagagacaacaaggattcatccccttctgtgttccactctgat
gacaactatgagtggaccacatggttcaatgtcgaccaccccggaggccgtggagactat
gagcagctggaggccattcgcttctactaccgttcccgagtgtgtgaaactccccgggca
atcgaagccagaaccactgaatgggtcccagcccgtgaaactggggagatggtccatgca
gaccccactgtcggcttctggtgccttaacgaggagcagggtcctgaacgcaactgctcc
aactactcagtccgtttcctctgtcccaaagatacaattgtgaacattcaggctaactgg
ggtccgtggtcagactgggacccatgccctgccctttgtggtcaggtgggggtccaactg
cgcaccagacactgccagtcacgcactatgccttgcagtggacctaaagtggaagtgata
gcatgcagtggacctgagtgcccaaaaacagattgctcccagcagtgtgtgatggggaag
gtgaatgctgagtgtgacgcatgcatgtgtgaggaacacatccttctgggttctgttcgt
ggtgcgggaggtctcactgctgaaggggcgactatccttcgctctggcaagctccttacc
cttaccgaccacaacgggcatttccgcatccctggtatctgccctgatggcaacactacc
ctgacagtcctcctgcagggccacgccaccctcagtgttgttgtgccccacagtgctgaa
cgtacctctgtcctcactgttcagctgaaaagaacagagaagcttcatgtgctgggcagc
cctgagagcaaagcaaggagggaaggacaaactgctgccttctgctgcaaagtggcagga
acacctcaaccagacaagtaccaatggtttcataacaacagcctcctggagaagcagtct
gacagcaccttggtcctaaaaaatctgctccctgagcagactggggagtattattgcaaa
gcaagtggtccctctggggctattaagaccaaaccagctacactcaaagtcttaggtaga
gacgagcattcatgtaatcccaaacctgaatcccacctcatccgtcttccacatgactgc
caccaaaacagcacagactccttttactacgatgtgggcaagtgcccttcaagtacatgt
tctggacagctggacaatggcatcaggtgcaaagacaaagtgacttactgctgtggtgtc
aaaaagatggagaagaggcagctaacatgccagggctaccaactacccaccatggtggtg
actgagtgcggctgccagaaatgtgtggacaccaagaccattgtgcacggtagggccgtc
gctgcagacaatggtgagccaatgaggtttggccatgtctttatgaatggagtcagaatc
agccgcacaggctacaaaggtacattctccatccaggttcctccagacacagagaggcta
gtcctgacttttgtggacaacatgcagaaatttgtcaacaccacaaaggtacttccattt
aacaccaagggaggggctgtttaccatgagatcaaacttctaagaaagaaacctccggtg
accatcagcccaacagaaaccaacactctggagcttggggaggtagaggggcaggaggca
atggttcaaatccagattcctccctatgccttctacacagaaaaaggagaagtcttcact
ggtaacgtgaatgctagcgtaacgttcctagaccccagagacgtctccacagcggctgca
gctcaaagtgatctcaactttgtaggagatgaaggagatacaattccgctgagaacctac
gggatgttctcagttgattttaggggtgaagaaaacaacgagccactaaacgcaggtgaa
gtgaaggtgttcctagattctgcccaggtgaagatgtctgagcacctcgataccatgaag
ctgtggtcactgaaccctgagactggcctgtgggaggaggaaggaagtctgcaggtggag
aagaaaagacgaggtaaaagggaggagagaacctttctgattggaaacatggaaatcaga
gagagacgtctttttaacctggacgtcccagagaaccgcaggtgttatgtcaaagtgagg
accttccgtagtgagcgcttcatgcccagtgagcaggtggagggagttgtggtgagtctt
ataaacatggagcccacagctggatactcctctaacccacgtgcctggggacgttttgat
agtgtcataactggctccaatggcgcctgtcttcctgctttctgcgatgaacaaaaagct
gatgcctactctgcgtatgtcatggccaaccttggaggagaggagctggaggccgtctct
tctgctcccaaactcaatcccaacttaattggagtgccccagccttacctgggtaagctg
aactacaggcggactgaccatgaagacccaagactgaagacgactgcattcagcatcaat
gtggcaaaaccaagtcccaacacagcggaggaaagcaatggaccggtgtacacatttgag
aacttgaaagaatgtgaggaggcctcgttcagtgcggcacacttccgcttctcaagagta
gaaggagaccgctacgattacaacacagtgccgttcaatgaagatgacccaatgagctgg
acagaggactacttgagctggtggcctaagcccatggaatacagggcctgttacgtcaaa
gtcaaaattaacagcccacatgagatcaatgtgcggtcccgtaacatgggcggcacccat
ccgaagacggtaggccagctgtatggcctccgagatagtcgcagcatccgtgacatggac
caggcaactatttcagctgtgtgcctggagttcaagtgcagtgggatgctgtacgaccag
gaacgtgtggatcgtaccctggtgaaggtgattccacaaggcagctgtaaaagagatcag
gtcaactcaatccttcaggagtatctggtcaaccatctgcccctcgccgtcaacaatgac
accaatgagttcactatgctagcacctcttgaccccctgggccacaactacggaatttat
acggtgacagaccaggatccacgcacagccaaagagattgcactcggacgctgctttgat
ggcacttctgatggtacatctcgtgtgatgaagagcaatgacggcgtagcgctgacgttc
acctgtggagatcgtgaggtggcgagccagagtgtcttccagtccctgcagagttctcaa
ggtcaaacagtaacaagcgtggtgagaggagaaggtaggcagaaccggcgcagacagagg
gccaacgcaccccgcagcaacagtagacgaagcacaagaaatcctgcaggaaagcgcaca
aaggccagaagctaa
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