Anoplopoma fimbria (sablefish): 129108316
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Entry
129108316 CDS
T09102
Symbol
cd44b
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129108316 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129108316 (cd44b)
04090 CD molecules [BR:
afb04090
]
129108316 (cd44b)
00535 Proteoglycans [BR:
afb00535
]
129108316 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129108316 (cd44b)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129108316 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
129108316 (cd44b)
Exosomal proteins of colorectal cancer cells
129108316 (cd44b)
Exosomal proteins of bladder cancer cells
129108316 (cd44b)
CD molecules [BR:
afb04090
]
Proteins
129108316 (cd44b)
Proteoglycans [BR:
afb00535
]
Cell surface proteoglycans
Others
129108316 (cd44b)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Hyaluronan
Cell surface receptors
129108316 (cd44b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
DUF6480
ECSCR
DUF2561
CSG2
zf_RING_Vps8_fungal
DUF8060
Rcr1-2
Motif
Other DBs
NCBI-GeneID:
129108316
NCBI-ProteinID:
XP_054476050
LinkDB
All DBs
Position
19:6797958..6810293
Genome browser
AA seq
387 aa
AA seq
DB search
MWTLVLGVTFGLLASSRSEQLQVNSRSCSYAGVFLAEGASRHSLNFDAARKVCEQQESNL
ASTEQILEAYDINMETCRYGWTSNMSIAILRHSYHENCANNMTGFIINSQDPEEPFDAYC
FDETAGPGQNCTKEFRVTVTLTSEAPAEPKPQASTSAEGQEVTTPKTRLEDASGSEDANR
TARDVIEMTTTNLIGLNQDEPDDATENPFGGSEDSTVRFTPTEFDRITGSGMMPPTEEEG
TSPTDETQLLTDNEQHIQTKKPDGDDTTTKPPQEQPNGKGQHDHQNDSSSGWLVIILVIV
VVAIILLLCAAVAMRKSLCGKQQTLMITSKDGGEGNGAAASASSSHAQEREQEMVTLMNK
EKIQENGNTEEFTVITLEESPDKEQLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcttgtcttgggggtcacctttggattattggcctcctccaggtcggaacaa
cttcaagtgaactcccgcagctgcagctatgccggggtatttcttgctgagggagcgagc
cgtcactccctgaactttgacgcagctcgaaaggtgtgtgagcagcaggagagcaacttg
gcgagtacagaacaaatcctggaggcctatgatataaacatggaaacatgcagatacggc
tggaccagcaatatgagcattgccatactcagacactcgtaccatgaaaactgtgcaaac
aacatgacaggcttcataattaattcacaagatcctgaagaaccctttgatgcctactgc
ttcgatgaaacagctggtcctggtcagaactgtaccaaagaatttagagtaacggtaacc
ttaacttcagaagcaccagctgaaccaaagcctcaggcctcaacatcagcagagggccag
gaagtgaccactccaaaaacacgactcgaggatgcttctggtagtgaggatgctaaccgt
acggctagggatgtgatcgaaatgaccaccactaatctcataggactgaatcaagacgag
ccagatgatgccaccgaaaacccctttggagggagtgaggacagcactgtgaggttcact
cctacagagtttgatcggatcactggatcagggatgatgccacccactgaagaggaggga
acctctccaactgacgaaacacaacttcttactgacaatgagcaacatatacaaacaaag
aagcctgatggagatgataccacaacaaagcctccacaagaacaacctaatggcaaagga
cagcatgatcaccagaacgacagttcatcgggctggctggttataattctagtgattgtg
gtcgttgctattattcttctcctgtgcgcagctgttgccatgagaaagagcttgtgcggc
aaacagcagaccctgatgatcacatccaaagacggcggcgagggcaacggggctgcagca
tcagcatccagctcccacgcccaggagagagagcaggaaatggtgaccctcatgaacaag
gagaagatccaggagaacggcaacacagaggagttcaccgtcatcacactagaggagtcg
ccagataaagaacagctggcttga
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