Anoplopoma fimbria (sablefish): 129108349
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Entry
129108349 CDS
T09102
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04110
Cell cycle
afb04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129108349 (smc1b)
04114 Oocyte meiosis
129108349 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129108349 (smc1b)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129108349 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
129108349 (smc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
129108349
NCBI-ProteinID:
XP_054476099
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All DBs
Position
19:complement(24598463..24613665)
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AA seq
1242 aa
AA seq
DB search
MGFLKQIDIENFKSWRGRTVIGPFMRFNCIIGTNGSGKSNVMDALSFAMGERVVALRVKH
LRDLVHGAHIGRPVHEPVRVTLRYCDDEEHETVFSRSISGDSSEYRINGDHVTLAKYIEE
LGKIGIVTKARNCLVFQGAVESIALKDPKERTKMFECISQSKEYAAEYDLKKKALMKAKE
DTQFHFNKKKSATVERKQVSQEKIEAQKYQALVDNLHQNRLQLSLAELYCNEKGINALSD
NLKEKQLAAAAKNKTLVKEEQTAKTYKKEHGRLTREQQHIEKEIRAQDHVLSQCRSQYIK
AKVNTSHHMKKAEEVREALRKSQKLIAIKEQELAEGRQDISELERTWRNYEKQQKKKKGA
SMERDIELDDSQLERYKELKELARKQGAVLNQQAEKLHWEVRADNEKMAFDQRRKKEVEA
SIRNNQTQLEDLIRRAEKIEEYTKSCKSSLEECRQREESLSAELQRGRQRSEELNQELGQ
VMEELGNAHLDSQESRCQQRRNELLERLRRLYPETVFGRLSDLCSPIHKKYQLAVIKVFG
RFMNAIVVSSEKVARDCICFVKEEGAERETFLPIDYLDVSPLNERLREVPGAKMVVDVVQ
VREAVGAAQLRKVVQFVCGNALVCETIKEARSVAFDGQTRIKTVALDGTLFTKAGVISGG
SSYLRTKARCWDEKDMMRLKARKDQLTAEMRDLMKLRRKDSDLKQISAQAQGIQTRFKYS
KTELENIQKKNIPKCQAEISRMESELANLDSQIQMQLESVEAKEAKMGKIRDQIYQIEDM
VFSDFCAEIGVDNIREYEKEHLKQQTEVDRKRLEFESQTTRLNARLEYEQGQLEQQKKKL
LKMEETIDKEERMMAEQREDEEKLLSAVEEGQKKLLELNNQLLSKKSQVAAAKAEQDQKT
QSLKEINKELVKLQREVMCAETALEQKRLARHNMLLACKIQSLPIILLSGSLDEISEVRL
DTDSESTSTTMNIYEREAQLVIDFSGLEPELRRLQTEEEVEAFMERLKESVSSVEGVLHR
TTTPNLKALAKMREVKDKLQGVTDAFDASTREARKCSQEFERVKAKRLNLFCRCFEHVCI
VIDQIYKRICRNNSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALA
LVFAIHSFRPAPFFILDEVDAALDNTNIGKVTSFIREESRENMQIIVISLKEEFFSKSDA
LLGVYSDFEECMFSRILTLDLRPYPLVDEDNGRQADTEKTPA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggggtttcttaaacaaatcgatattgaaaactttaagtcatggcgagggagaaccgtt
atcggccccttcatgaggtttaactgtataatcggcacaaacggctccggtaagtccaac
gtcatggacgccctgagcttcgccatgggggagcgcgtggtcgctctgcgcgtgaagcac
ctcagggacctcgtgcacggagctcacatcgggaggcccgtgcacgagcccgtccgcgtg
accctcaggtactgcgatgacgaggagcacgagacggtgttcagcaggagcatctcaggt
gactcctctgagtatcgcatcaatggtgatcatgtcactctggccaaatacatcgaggag
ttggggaagatcggcattgtgaccaaagctcgaaactgtctggtgttccagggggcggtg
gagtccatagctctgaaggacccgaaggagaggaccaagatgttcgagtgcatcagtcag
tcgaaggagtacgctgcagagtatgacttaaagaaaaaggcccttatgaaggccaaagag
gacacacagtttcacttcaacaagaagaaatctgctactgtggagaggaagcaggtgtcc
caggagaaaatagaggcccagaagtaccaggcgctggtggacaaccttcaccaaaaccgc
ctgcagctgagcctggctgagctctactgtaatgagaagggcatcaacgctctcagtgac
aacctgaaggagaaacagctggctgcagctgctaagaacaagaccctggtgaaggaagag
cagacggccaaaacctacaagaaggaacatggacgtctcaccagagagcagcagcacata
gagaaggagatccgcgcccaggatcatgtcctgtcccagtgccggtcccagtacatcaaa
gccaaagttaacacctcccatcacatgaagaaggccgaagaggttcgtgaagccctgagg
aagagtcagaagctgattgctattaaagagcaggagctcgcagagggacggcaggatatc
tctgagctggagaggacctggaggaactatgagaagcagcagaagaagaagaagggagcc
tccatggaaagagacatcgagctggatgacagtcagctggagcgatacaaagagctgaag
gagctggcccgaaagcagggcgctgtcctcaaccagcaggccgagaaactgcactgggag
gtgagagcggacaacgagaagatggctttcgaccagcggcgtaagaaggaagtggaggct
agcatcaggaacaaccagactcagctggaagatttgatacgcagagcagagaagatagag
gagtacaccaagtcctgcaagtcgtcccttgaggagtgccgtcagcgggaggagagcctc
agtgcggagctgcagcgaggccgccagcgcagcgaggagctgaaccaggagctgggccag
gtgatggaggagctggggaacgcacatctggacagccaggagagcagatgccagcagcgg
cgcaacgagctgctagagaggctccgcagactctaccctgaaacagtgttcggtcgtctg
tctgacttgtgcagcccgatccataagaagtaccagctggctgtcatcaaggtgtttggc
cgcttcatgaacgccatcgtggtgtcctcagagaaagttgcccgggactgtatctgtttc
gtcaaggaggagggagccgaacgcgagaccttcctgcccatcgactacttggatgtgagt
cctctgaatgagcggctgagggaggtgcccggtgccaagatggtggtcgatgttgtacag
gttagagaggccgtgggtgccgcccagctgaggaaggtggtgcagtttgtctgcggcaac
gctctggtgtgtgagaccatcaaagaagcacggagcgtggcctttgacggacagacgcgc
atcaagacggtcgctctggacgggacgctgtttacaaaggccggcgtgatctctggaggc
tccagctacctgaggaccaaagctcgatgctgggacgagaaggacatgatgcggctgaag
gcacgcaaggaccagctgacggcagagatgcgcgatttgatgaagctcaggcggaaggac
tcagacctgaaacagatctctgctcaggctcagggcattcagacccgattcaaatactcc
aaaactgagctggaaaacattcagaagaaaaacatccctaaatgccaagcggagatttct
cggatggagagcgaattagcaaacctggactctcagatccagatgcagctggagagtgtg
gaggcgaaggaggcaaagatggggaagatcagagaccagatctaccagattgaggacatg
gtgttttctgacttctgtgctgagatcggtgtggacaacatcagagagtatgaaaaggag
cacctgaagcagcagactgaggtcgacaggaagcggctggagtttgagagtcagaccact
cgcttgaacgcacggctggagtacgaacaaggtcaactggagcagcagaaaaaaaagctc
ctcaaaatggaggaaaccatcgacaaggaggagagaatgatggccgagcagagggaggat
gaggagaagctgctgtcggcggtggaggagggtcagaaaaagctgctggagctgaacaac
cagctgctgtctaagaagagccaggtggccgctgccaaagctgagcaggaccagaaaacc
cagagcctcaaagagatcaacaaagagctggtgaagcttcagcgggaggtgatgtgcgct
gagacggccttggagcagaaacgcttggcccgacacaacatgctgctggcctgcaagatc
cagagtctgcccatcattctgctgtcggggagcctggatgaaatcagtgaagtgcggctg
gacacagactctgaaagcacttcaaccaccatgaacatctatgagagagaggcacaactc
gtcatcgacttctccggcctggagccagaactcaggagactgcagacagaggaggaggtg
gaggccttcatggagaggctgaaggagtccgtctcctccgtagagggagtgctgcatcgc
accaccaccccgaacctcaaagctctggctaagatgagggaggtgaaggacaaactacag
ggagtcacggacgcgtttgacgccagcaccagagaggccagaaaatgcagtcaggagttc
gagcgagtcaaagccaaacggttgaacctcttttgccggtgcttcgaacacgtttgtatc
gtaatcgatcagatctacaaaagaatatgcaggaacaacagcgcccaggccatcctgagt
gcagagaatccagacgagccgtatctcggcggcatcaactacaactgcgtggcgccgggg
aaacgcttcatgtccatggacaacctgtccggtggagagaaggccatcgctgccctcgcc
ctggtgtttgccatccacagcttccgtcctgctcccttcttcatcttggacgaggtggat
gcagcgctggacaacacgaacattggaaaggtgaccagcttcatcagagaggagtccagg
gagaacatgcagatcatcgtcatctccctgaaggaggagtttttctccaagtctgacgct
ttgctgggagtctactcagattttgaagaatgcatgttcagccgcatcctgacccttgac
ctgcgaccctaccctctggttgacgaggacaacgggagacaggcggacacagagaagaca
cctgcatga
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