Anoplopoma fimbria (sablefish): 129108350
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Entry
129108350 CDS
T09102
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129108350 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
afb03029
]
129108350 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129108350 (samm50)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
129108350 (samm50)
Transporters [BR:
afb02000
]
Other transporters
Pores ion channels [TC:
1
]
129108350 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
129108350
NCBI-ProteinID:
XP_054476100
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Position
19:complement(23819018..23826759)
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AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMHGPELGVQPDDIDAPEIEHEPKQEVLENKNVVVQQVHIDGLGRTKE
DLLTYEISEVFRAKNLIEVMRKSHEARQKLLRLGIFRKVEVVIDTSRGEQALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNVLGRAEKMTFQFSYGTKETSYGLSFFKPQ
PGNFERNISLNMYKVTGQFPWSSLRETDRGISGELSFPLWKTNQTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHSMVIDTRNSSILPRKGGLLKIHQELAGYTGGDASFLKEDF
ELQLNKTLFWDSVLSASLWGGLLLPIGDKPTNIADRFYLGGPTSIRGFSMYSMGPQSEDM
AGDYLGGEGYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGEGPQAHLKK
LAECIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGFQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgccaggagcctggaccctctgcccatgcatgggccagagctagga
gtccaacctgacgacatcgatgctccggagattgagcacgagccaaagcaagaagttctt
gagaacaagaatgtcgtagttcaacaagtgcacatagatgggctcggaagaaccaaggag
gacctgctgacttatgaaatctcagaagttttccgggcaaagaacttgattgaggtgatg
cgaaagtcccatgaagcccgacagaagctgctgcgtctcggtatcttcagaaaagttgaa
gtcgttatcgacacctcaagaggagagcaagctcttcctaacggcctcgacgtgacgttt
gaggtcaccgagctgagacggatgacgggcagctacaacaccatggttggaaacaacgaa
ggaagcatggtactgggcctgaagttacccaatgtattaggtcgagcggagaaaatgacc
ttccagttctcctacggcaccaaagaaacatcctacggcctctctttcttcaaaccccaa
ccagggaactttgaacgcaatatctccctcaacatgtacaaagtaacgggtcagtttcca
tggagttctctgagggagacggatcgaggaatctctggagaactgagcttccccctgtgg
aagaccaaccaaaccctgaagtgggagggagtgtggagagagctgggctgtctggctcgc
accgcctcgtttgccgtccgggaggagagcggccattccctcaagtcctcactctcgcac
tctatggtcatcgacaccagaaactcctccattcttcccaggaaaggcggcctgttgaag
atccatcaggagcttgctggttacactgggggagacgccagtttcctgaaggaggacttt
gagctccagctcaacaaaactctcttctgggactcggtcctttctgcctcattgtggggc
ggtttgctcctacccattggtgacaagccaacaaacatagcagacaggttctatctaggt
ggccccaccagcatcagaggattcagtatgtacagtatgggcccacagagtgaagatatg
gcaggcgactacctgggaggagagggctactgggctggaggcctccacctctacacccct
ctacccttcagaccaggcaaggggggctttggagacctcttcaggacccacttcttcctc
aatgccggaaacctttgtaacctcaactatggtgaggggccacaagcacatctgaagaaa
cttgcagaatgcatccgttggtcatatggactcggaattgtgctgcgtttggggaacatt
gccagactggagctgaattactgcattcccatgggagtccagagtggagacaggatatgt
gacgggttccagtttggagcaggaatccggttcctgtga
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