Anoplopoma fimbria (sablefish): 129108418
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Entry
129108418 CDS
T09102
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129108418 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129108418 (fan1)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
129108418 (fan1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
129108418 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
SAP
BsuBI_PstI_RE
Motif
Other DBs
NCBI-GeneID:
129108418
NCBI-ProteinID:
XP_054476203
LinkDB
All DBs
Position
19:complement(18258364..18264907)
Genome browser
AA seq
1008 aa
AA seq
DB search
MTERAHKDTLRRGLSLSRNKKKGKVKAGTSATASTSSSPITSFFSSQPPPKLACPLCGQF
VPRFKINEHIDLQCPNFERGDSSAASASDSVVPSIQLSPRRNPPKSPELDPENEEEVNET
KTSPYFKKNNSQQAPREIKSKSVVRTIGLGSLSSKLSRKCRKVPERTQTESKHAPMCPEN
EICSSETLSSSQKENLQSLDDNKDCVTVIDLTETSDDTPTALEDLSRSHKGRKLEQKASK
TETVLKRVAPKLRSSSSKLIKRKKETTSTGRVSDFRKKAKYEESSGEPDEVLCSQSLAET
TDTDRLITEVPSTRTCDDPLSSEETYEEGAAAIICDSLSESVPENTASSDQESSEPPRLP
YYIRNFLTVLRAVLENEDDRSLFNQEDMSLVQAFEKLSVMGQKLYVRLFQRKLKWLQVNK
LDYEEICTDLGPVAQELVRGGFLQAESDLQDLGEALDLLPAPELKALAKTFHLGNSGTQK
QQLVDGLLRLSRQKSFFSLSPAQSNIGAVILKRAKQLASSCVRLCRGPRAVFSRILLLFS
LTDTMDEEEMAAGGQSQLFTILLVNSGRLAFPDYTVQRKAKVFRDRDDLIRYEASMRTLQ
EVVSAMQGGQWEEAMELYTAAKGAWQELKKNHDLSHQEELPVFLRSFTTGWAYTRILSRG
VDILQRLRHYEEAVEELRSLLLQFVYCPDSRGRWWDRLALNLHQHLKQPEQAVCAIRDGL
LDPLVRTGHKLSLHQRAVRMKESASLKRYRLQLKDLPTIQVQDVTHVTIRGQLFPHEGGT
GKSKFLLPANGEGDEGAEATVICSVEELSLAHYRQQGFDQGIHGEGSTFSTLFALLLWDI
IFMEGIPDVFRNLYQTCPLDLYTDCFYENRKEAIDSRVQLLCESSVETLHDMLEDVWTSQ
EGKVCSLVSWERFSSLQHAQSLVSCLGGAFLGGIITRMSKDYRHCRGGLPDLVVWNTSNN
TYKLVEVKGPTDRLSQKQQIWLDELQKLGADVEVCHVTATGARGARLE
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagagcccacaaagacacactcagacggggtttgtctttgtccaggaataag
aagaaaggcaaagtcaaagctgggacttctgccactgcttccacctcatcatctcccatc
acctcgttcttcagcagccagcctcctcctaagctggcctgccccctgtgtggccagttt
gtaccaagattcaagatcaatgagcacattgatttgcaatgtccgaactttgagagagga
gacagcagtgccgcctcagcaagcgatagtgttgtgccaagcatccagctgtcacccagg
aggaatcccccaaagtccccagagctggatccagagaatgaagaagaggtcaacgagaca
aagaccagtccttattttaaaaagaataactctcagcaggcaccgcgggagataaaaagt
aaaagtgtggtcaggacgattggcctgggaagtctctcctccaagttatctaggaaatgt
cgtaaggtgcctgagaggacacagacggagagtaaacatgcaccaatgtgtcctgaaaat
gagatatgttcttctgagacactcagcagctcacagaaagaaaatcttcagagtttagat
gacaacaaagactgtgtgacggtcattgaccttacagaaactagtgacgatactccaact
gcactggaagatctatcacgttcacataaaggacgaaaacttgaacagaaagcatctaaa
acagagactgtcctgaaacgggttgctccaaagctgcgctcttcttcctccaaactaata
aagagaaagaaggaaacaacttccactggcagggtgtctgatttcagaaagaaagctaaa
tatgaggagagcagcggggagccagatgaggtgttatgtagtcaaagtttagcagagaca
actgacacagaccggcttataactgaggtaccttctaccagaacctgtgacgaccctttg
agttcagaggaaacatacgaggaaggtgctgcagcgattatttgtgattcactgtccgag
tctgttcctgagaacaccgctagcagtgaccaggagagctctgagcccccacggcttccc
tactacatccgtaacttcctgaccgtactacgagctgtcctggagaacgaggacgaccgg
tcactgttcaaccaggaggatatgtcactcgtgcaagcattcgagaaactctcagtcatg
gggcagaagctgtatgtgagactcttccagaggaaactgaagtggctccaagtaaataaa
ctggactatgaagagatatgcactgatctgggacctgttgctcaggagttggttcgaggt
ggtttcctacaggcagagagtgaccttcaggatttgggggaggctctggatctccttcct
gctcctgaactcaaagctctggctaagactttccatctgggcaactctgggactcagaaa
cagcagctagtggacggacttctgcgtctgagcaggcaaaagtcctttttctctctgagc
cctgctcagtccaacattggggctgtcatcctcaaaagggcgaagcagcttgcaagttcc
tgtgtgcgcctgtgtcgtggtcctcgagctgtcttttctcgcatccttctcctcttctct
ctgacggacaccatggatgaagaagagatggcggctggtgggcagagtcagctcttcacc
atcctgctggttaactcaggacgccttgccttcccagactacacagtgcagcgtaaagcc
aaggtgttccgggacagagacgatcttatcaggtatgaagcatccatgcgaaccctgcag
gaggtggtctcagctatgcagggaggtcagtgggaagaagccatggagctctacactgct
gccaaaggtgcctggcaggagctgaagaaaaaccatgacctcagtcaccaggaggagctg
cctgtgttcctgcgcagcttcactacaggatgggcctacactcggatcttatccagaggg
gtggatatcttgcagaggctacgtcactacgaggaagcggtagaggagctgcggtcttta
ctgttgcagtttgtttactgtcctgacagccgagggcgttggtgggacagactggcacta
aaccttcaccagcacctaaaacaacctgagcaagctgtttgtgctatcagagatgggcta
ttggaccctctggtgcgaactggacacaaactttctcttcaccagagagctgttaggatg
aaagagtctgccagcttgaagaggtatcgccttcaacttaaagacctgcccaccatccaa
gtccaagatgtcacacatgtgaccatccggggacagctgttccctcatgagggcggcacg
gggaaatcaaagtttcttctaccagcaaatggtgaaggggacgagggtgctgaggccact
gtgatatgctctgtggaggagctgtctttagcacattaccgccaacaaggctttgatcaa
gggatccatggagagggctcaacattctcaacattgtttgctcttctgctgtgggacatc
atttttatggagggcattccagatgttttccgaaatctgtaccagacatgtcctttggat
ctctacactgactgtttctatgagaacagaaaagaagcgattgactctcgtgtgcagtta
ctctgtgagtcatcagtggagacgctgcatgacatgttggaagatgtttggacctcccag
gagggtaaagtgtgttcactggtcagctgggagcgtttctcatccctgcaacacgcacag
tctctcgtgtcatgcctgggtggagccttcttaggagggataataacaagaatgtccaaa
gactacagacactgccgtggaggtttgcctgatctagtggtgtggaacacttcaaacaac
acctacaagctggtagaggtgaaggggcccactgaccggctgtcccagaaacaacaaata
tggctggatgagctgcagaagctgggggctgatgtggaggtgtgtcacgtgacggcaact
ggagccagaggagctcgtctggaataa
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