Anoplopoma fimbria (sablefish): 129108437
Help
Entry
129108437 CDS
T09102
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03020
RNA polymerase
afb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129108437 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
129108437 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129108437 (polr2c)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129108437 (polr2c)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129108437 (polr2c)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129108437 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
129108437
NCBI-ProteinID:
XP_054476221
LinkDB
All DBs
Position
19:complement(15318801..15322742)
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVATIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTMDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVFPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFFYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagcctacggtgaaaatcacagaactgacggacgagaatgtcaaa
ttcgtcattgaaaacaccgacttggcggttgcaaactccatccgccgagtcttcatgtca
gaagtcgccactatagcaattgactggatccagatcgatgccaattcctcagtactgcac
gatgagttcattgcacacagagtgggtctcatacctctcacaagtgatgacatcgtggac
aaaatgcagtattctagggactgtacctgtgacgacttttgcccggagtgttccgttgag
ttgacgatggacgttcgatgtaccgaggaccagacgcgtcatgtcacctctcgtgacctt
ttgtccaacaaccccagagtcatcccggtgacctccaggagtcgagacaacgatcccaac
gactacgttgaacaagatgacattttactggtgaagctccgtaaaggtcaggagctacgg
ctcagggcgtacgccaagaagggcttcggcaaggagcacgccaagtggaacccaacagcg
ggggtgtccttcgagtacgacccagacaacgcactgaggcacacggtcttcccgcgaccc
gaggagtggccaaagagtgaatactctgagattgaggaggatgaggttcaggctccctat
gaccccaatggaaagccagaaaggttcttttacaacgtggagtcgtgtggctcgctgcga
ccggagaccatcgtcatgtcagccctggccgtcctcaagaagaagctcagtgacctgcag
actcagctgagccacgagatccagagcgacgtgctcaccatcaactga
DBGET
integrated database retrieval system
