Anoplopoma fimbria (sablefish): 129108464 Help Entry 129108464         CDS       T09102                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03040   Spliceosome Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129108464 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:afb03021]     129108464 (sf3b3)    03041 Spliceosome [BR:afb03041]     129108464 (sf3b3)    03036 Chromosome and associated proteins [BR:afb03036]     129108464 (sf3b3) Transcription machinery [BR:afb03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      129108464 (sf3b3) Spliceosome [BR:afb03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     129108464 (sf3b3)  Complex B     129108464 (sf3b3)  Complex C    U2 SnRNP specific factors     129108464 (sf3b3) Chromosome and associated proteins [BR:afb03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      129108464 (sf3b3)     TFTC complex      129108464 (sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_EML Motif Other DBs NCBI-GeneID:  129108464 NCBI-ProteinID:  XP_054476269 LinkDB All DBs Position 19:11280244..11305108 Genome browser AA seq 1217 aa AA seqDB search MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVCSEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPLDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGTTLDQVQLEQNEAAFSVAVCRFPNTG DDWYVLVGVARDMILNPRSVSGGFIYTYRLVSGGEKLEFVHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTSIHTIGQRVIVTDVQESLFWVRYRRNENQ LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESMVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacatcacccttcagcgtgccacgggcatcactcatgccatccatgga aacttctcaggtaccaaaatgcaggagatcgttgtttccaggggaaagatcttggaatta ttgcggccagatgccaacacgggaaaggtgcacactctgctcacagtggaggtgtttggc atcgttcggtccctgatggccttcagactcactggaggaaccaaagactacattgttgtt ggaagcgacagtggtcggattgtcatcctggaatatcatccatcaaaaaacatgtttgag aagatccaccaggaaacttttggaaagagtggctgccggcgcatcgtccccggacagttc ctcgctgttgacccaaaaggcagagctgttatgatcggagccatagagaagcagaagctg gtttatattctgaacagagatgcagctgcaaggctgaccatctcctctccactggaagca cataaagcaaacacactggtctaccatgtggtaggagtcgatgtcggctttgaaaatccc atgtttgcctgcctcgagatggattatgaggaagctgacaatgacccgacgggagaagcc gccgccaacacgcaacagacgctcaccttttacgagctggacctcggcttaaatcacgtg gtccgcaagtacagcgaggctctggaagagcacggaaatttcctcatcactgttcctggt ggttcggatgggcccagtggagtactgatctgctccgaaaactacatcacttacaagaat tttggagaccagcctgacattcgctgtcccatcccgcgacgcaggaatgacctggatgac ccagagcgtggaatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc ttcctggcccaaacggagcagggagacatctttaaggttaccctggagaccgatgaagaa atggtcacagaaatcaggctgaaatactttgacacgatccctgtagcaacagccatgtgt gtcctgaagactggcttcttgtttgtgtgttcagaatttggaaaccattacctttaccag atcgctcacttgggtgacgatgatgaggagcctgagttttcctctgcaatgccgttggaa gagggagacaccttctttttccagccccgccccctcaagaaccttgtgctggtggacgaa caggagaacttatcgcccatcatgtcctgtcagattgcggatttggccaatgaagataca ccacagttgtacgttgcctgtggtcgaggaccccggtctactctgagggtccttagacat ggactggaggtatcagagatggctgtgtctgagcttcccggtaaccctaacgctgtgtgg acagtacgcagacatgtggaagatgagtttgatgcctacatcatcgtatctttcgtgaac gcaactctggttctgtccattggagagactgtagaggaagtgacagattctggatttctg ggaacgacgcctactctctcctgctcactgctcggtgaagacgcgctggtgcaggtgtac ccagacggaattcgccacatccgagcggacaagcgtgtgaatgagtggaagactcctggc aaaaagaccattgtacgatgcgctgtgaaccagcggcaggttgttatcgcactcactgga ggggagctggtgtactttgagatggacccgtccggtcagctcaatgagtacacagagcgg aaagagatgtctgcagacgtggtttgtatgagcctcgctaacgttccacctggtgagcag cgctcacgattcctggccgtgggactggttgacaacactgtccgaatcatctccctggac cctttggactgcctacagccgttgagtatgcaggccctgccagcccagccagagagtctg tgtattgttgagatgggaggggttgagaaacaggatgaacttggagaaaagggaaccatt ggcttcctctacctcaacatagggcttcagaatggtgtgctgctgaggactgtgctggac ccagtaactggtgacctgtcagacaccagaacacgctatctgggatcacgacctgtcaaa ctcttcagagtccggatgcagggacaggaagctgtgctggcaatgtcaagtcgctcctgg ctcagctactcgtaccagtctcgcttccacctgacccctctgtcatatgagactctggag tacgcctctggctttgcctcggagcagtgccctgaaggcatagtggccatttccaccaac acactgagaattttggctttggagaaattaggagccgtcttcaaccaggtggcctttcct ctgcagtacactcccaggaagtttgtaatccacccggagaccaacaacctcattttgatc gagactgaccacaatgcctacactgaggcaaccaaagcccagagaaagcaacaaatggct gaggagatggtggaggctgctggtgaagatgaaagagaactggctgctgagatggccgct gccttcctcaatgagaatctcccagaagccatttttggtgcacccaaagccggagccggc cagtgggcctcactggtgcgtctcgtcaaccccatacagggtacaacactggaccaggtg cagctggaacagaacgaagctgctttcagcgttgctgtgtgtcgtttccccaacacagga gatgattggtatgttctggtgggcgttgccagagacatgattctcaaccccagatcagtg agcggcggctttatctacacctatcggctcgtcagtggaggcgagaaactggagtttgtg cacaaaaccccagtagaggacgtgcctttggccattgcgccgttccagggacgagtcctg gttggagttggaaaactgctgagaatctacgacctaggcaaaaagaagctgctccgcaag tgtgaaaacaagcacgttcccaacctggtgactagcatccacaccatcggccagcgtgtg atcgtgactgacgttcaggagagcctgttctgggtccgttacagacgcaacgagaaccag ctcatcatctttgctgacgacacgtatccccgctgggtgaccacagcctgtctgcttgat tacgacaccatggcttctgctgacaagtttgggaacatcagcattgtgcgtctacccccc aacaccagcgatgatgtggatgaagaccccacaggaaacaaagctctatgggacagaggc ctccttaatggagcatcacagaaggctgaggtgatagtgaactaccatgttggtgagaca gtgttatccctccagaaaaccactctgatccctggaggttcggagtccatggtctacacc actctgtctggaggcatcggcatactggtcccattcacatcacatgaggaccatgacttc ttccagcatttagagatgcatatgcgctctgagtttcctcctctgtgtggcagagaccat ctcagctttagatcctactacttcccagtcaagaatgtgattgacggagatctatgtgag cagttcaacagtatggaccctcacaagcagaaaagtgtggcagaagagctggacagaacg ccgcccgaggtctctaagaaactggaggacattcgcactcgttacgccttctaa

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