KEGG   Anoplopoma fimbria (sablefish): 129108576
Entry
129108576         CDS       T09102                                 
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B
  KO
K16482  centriolar protein POC1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129108576 (poc1b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:afb03037]
    129108576 (poc1b)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    129108576 (poc1b)
Cilium and associated proteins [BR:afb03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   129108576 (poc1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Ge1_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_Nup120_160 WD40_like Beta-prop_WDR75_2nd PROPPIN IgD_del_linker
Other DBs
NCBI-GeneID: 129108576
NCBI-ProteinID: XP_054476415
LinkDB
Position
19:complement(25614370..25660361)
AA seq 529 aa
MHTMASVMEDPALERHFKGHKDAVTCADFNPNCKQLASGSADKSLMIWNLAPKARVYRYV
GHQDVITGVQFSPSGNLVATSSKDRTVRLWTPSMKGESTVFKCHTAAVRSVAFSHDGQRL
VTASDDKSVKVWSVHRQCFIYSLNQHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSTKH
CINCFTDYGGSATFVDFNSSGTCIASSGADSTLKIWDLRTNKLIQHYQVHCAGINSFSFH
PSNNYLISGSSDGTVKILDLLEGRLIYTLHGHKGAVITVAFSRAGELFASGGADGQVLMW
RTNFDTKSYQDVLQQHGRRSTPDPPPHLTDIHPRGPHLHLPKPTAIRISQTVADTQSSDP
HVVELGHSVHRTTLLKSRAHLTPTQAAANGHHSNGLPARHTASSRVGGWMGEERTSRAGA
PVWSQTRDSGGGRGRREEEEEEEERGQTHPLEVLSGHPSSLDSTLRHIVQQLDILTQTVS
VLEERLTLTEDKLKECLLNQSQILQDVRSSGERRRTESEDTDGSPVHFT
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgcacactatggcgtctgttatggaggacccagccctagagagacacttcaagggccac
aaagatgctgtcacctgtgcagacttcaatccaaactgcaaacagctggcttcgggttca
gctgataagagcctgatgatctggaatctggctccaaaggcgagggtataccgctacgtt
ggccaccaagacgtcatcaccggggtgcagttctccccctccggtaacctggtggccact
tcctccaaggacagaacggtgcgactgtggaccccttccatgaaaggagagtcaacagtg
ttcaagtgccacacggccgccgtgcgcagcgtcgccttctcccacgacgggcagaggctg
gtgacggcgtccgacgacaagtccgtcaaagtgtggagcgttcaccgccagtgcttcatc
tactccctcaaccagcacaccaactgggtgcgctgtgccaggttttctccagacgggcgg
ctgatagcgtcctgtggagacgaccgcaccgtccggctgtgggacacgtccaccaaacac
tgcatcaactgtttcaccgactatggaggatcagcaacgtttgtcgatttcaactcaagc
ggtacctgcatcgcgtcctccggagccgacagcaccctgaaaatctgggatctacggacc
aacaagctgattcagcattaccaagtccactgtgcaggaatcaacagcttttccttccac
ccgtccaacaactacctgatcagtggctccagtgacggcactgttaagatcctggacctg
ctggagggccgcctcatctacaccctgcatggacacaagggcgctgttatcacagtagcc
ttttccagggcaggagagctctttgcctcggggggagcggatggtcaggtgctgatgtgg
aggacaaactttgacaccaaatcctaccaggacgtcctgcaacaacacggccggaggtcc
accccggaccccccaccccacctcactgacatccaccccagaggaccccacctccacctc
ccaaagcccacagccattcggatcagtcagacggtggcagacactcagtcctctgatcct
cacgtcgtagagttgggccattccgttcacagaaccacgctcttaaaaagtcgagcacac
ttgacgcccacgcaggccgccgccaacggtcaccactccaacggcttgccggcgcgtcac
acggccagttcaagagtgggaggatggatgggagaggaacgtaccagtagggcaggtgcg
cctgtttggagccagactcgggacagtgggggaggaagaggaaggagagaggaagaggag
gaggaagaggagagagggcagacgcacccattggaagttctctccggtcatccatcgagt
ctggactctaccctgagacacatcgttcagcagttggatattctcacgcagactgtttca
gtgctggaggagcgtctcaccctgactgaggacaagctgaaagagtgtctcctcaaccaa
tcccagattctccaggacgtgaggtcgtcgggcgagaggcggaggacggagagcgaggac
acggatggatcacctgtccatttcacctga

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