Anoplopoma fimbria (sablefish): 129108631
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Entry
129108631 CDS
T09102
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129108631
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129108631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
129108631
NCBI-ProteinID:
XP_054476479
LinkDB
All DBs
Position
19
Genome browser
AA seq
1683 aa
AA seq
DB search
MDTKGQSGNSKRASLKRTASGSQKAQRVWIERTFVKRECIHKFPTKDPTRCACGQLTTQH
VAIPAGANSLEEANQLVQIDTPKDKWSVIKHTRTYPTDAYGLIEFQGGGFINKAMYIRVS
YDTKPDNLLHLMVKDWQLELPTLLISVHGGLQNFDLQPKLKQVFGKGLIKAAVTTGAWIF
TGGVNTGVMRHVGDALKDHSSKSRGKVCAIGIAPWGILENKEDLIGKDVNKAYQTMANPL
SKLAVLNNSHSHFILTDNGTCGKYGSEVKLRRLLEKHISLQKINTRLGQGVPLVCLIVEG
GPNVISIALESLRDDPPIPVVVCDGSGRASDIISFAHKFSEEGGQVNDDVREQLLVTIQK
TFNYSKSQSQQILLMVMECMKKRELITVFRMGSEGQQDIEMAILTALLKGTNAAAADQLS
LALAWNRVDIARNHIFVYGHNLPPAGAMTSSTTSAAPTQEKKSPSTATQNKGRGKKGKGK
GKAKPEPPEETDPRKLELIRWVNSLEQAMMDALVLDRVDFVKLLLENGVNIHHFLTIPRL
EELYNTKLGPANSLNAVVRDVKKGNLPPDYQITVIDIGLVLECFMGGAYRSNYTRKAFRN
LYNNLYGLKRPKALKLLGMEDDEPRSKGKKKGKKKKEEEVEIDVDDPEVCRFKFPFHELM
LWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHECSESELVDDISQDLENNSKEF
GQLAYELLDQSYKHDEQVAMKLLTYELVNWSNSTCLKLAVAAKQRDFIAHTCSQMLLTDM
WMGCLRIGKNPGLKVILGIVFPPLILLLDFRLGNEASTDKEQGKDKDDDTKSSKDPNNDA
TSQKGDEEEGSTNVHKIPIAKRFFEFYNAPFTKFWFNTICYMGYLMLYNYIILVKMERWP
SLQEWTVIAYILTLGSEKIRQILMSEPGKLKQKISVWLEEYWNITDLAAICTFLFGLMLR
LQHEPYLGYGRVIYCIDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMMYFVVIMLVVL
MSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGEHLYDE
DGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFCEIKSISNQVWKFQRYQL
IMTFHDRPILPPPLIIFSHLYILFNRLFRRCAKKKQEGELDEKDRGLKLRLNPEELKCLY
EFEEQCVEEYFREKEDEQQSSSGERIKVTSERVENMSMRLEEVNERENTMKASLQTVDLR
LAQLEEIHGRMAVALEKLAGVDRLELTRTYSRNSSAGDPSSLLRQGSINSADGYSLYRFH
MDMEEFASKQKDTDETTKTAVERQKSLRQASSICTLNPKEGGQTLEVGGVERSRPSSCVD
ILISPCEQKPVSAASSQETLSNLKHGSTVLLDRLKPCSPPKRTKSLRYYPVENQPTSPLT
KRRAMSTIIVSPPDELEEVDEPTKKSQLPSATSSSPKRTKSLRYIPSEIQSQTSPITKKR
AMSSIIYNPSEAGDDVQTADYKSVLEQITNTPNQWPAKLEYQVHPSTIGHMPKVSTVRAL
SQQFEASTAPTELKKDENQMDHIPLESEGAGPAEEPAANQTKMKAKRNLSDTTGYLTVAD
EKYFPSQRSQSFNASERKEKVVSHEPRASSSERDLVEACRGAGDEAGKKMEVEKKEDDPQ
ENK
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaagggccagagtggcaactctaaacgggcctccctcaaacgcaccgcatct
ggctcacagaaggcacaaagagtttggattgagaggaccttcgttaaaagagaatgtatt
cacaaatttcccaccaaggacccgaccagatgtgcctgtggtcagctgacaacgcagcac
gtggccatccctgctggtgccaactctctggaggaagcgaaccagctggtgcagattgac
accccaaaggataaatggagtgtgatcaagcacaccaggacctacccaacagacgcctat
ggcttaatcgagttccagggtggaggattcatcaacaaggccatgtatataagagtctcc
tatgacaccaaacctgacaacctgctgcatttgatggtaaaggactggcagttggaactg
cctaccttgctcatctctgtccacggaggtctccagaacttcgacctgcagcccaaactc
aagcaagtgtttggcaaaggcctgatcaaagctgccgtcaccaccggagcttggatcttc
acgggcggagtcaacacgggggtgatgcgtcatgtgggagatgccttaaaggaccattcc
tccaagtcaagagggaaagtgtgtgctataggaattgctccatgggggatcctggagaac
aaagaggatctcatcggaaaagatgtaaacaaggcctatcagactatggcaaacccactg
agcaagctggctgtgctcaacaacagccactcccacttcatcctgaccgacaacggcacc
tgtgggaagtacggctctgaggtcaaactccgccggctgctggagaagcacatctctctg
cagaagatcaacactcgtttgggtcagggggttcctctagtgtgtctgatagtggaggga
ggccccaacgtgatctccatcgcactggagagtctgagagacgatcctcccatccccgtg
gtggtgtgtgacggcagcggccgagcttccgacatcatttccttcgcacacaagttctca
gaggaaggaggccaggttaatgatgatgtcagagagcagcttttggtaactattcagaag
actttcaattatagcaaaagccagtcgcagcagatcctgcttatggttatggagtgcatg
aagaaaagggaactgatcacagtttttcgaatgggttctgagggacaacaagatattgaa
atggccattcttactgccctgttaaaaggcacaaacgcagcagcagctgaccagcttagt
ttggctctggcctggaacagagtggacattgctcgcaatcacatatttgtttacggacac
aatttaccacctgccggtgccatgaccagcagtacaacctctgcagccccgactcaagag
aaaaagagtccttccaccgctactcaaaacaaaggccggggaaagaagggaaaggggaaa
ggaaaggcaaagcccgaacctccagaggaaacagaccctaggaagttggagttgattcgt
tgggtgaactctctggagcaggctatgatggatgctctggtgcttgaccgagtggacttt
gtcaaactgctccttgagaatggggtcaatatccaccacttcctcaccattcccagactg
gaggagttatacaacacgaaacttggccccgctaattcactgaatgctgtggtcagggat
gtcaaaaagggaaaccttccaccagattatcagatcactgtgattgatattggtctggtg
ctggagtgcttcatgggaggagcttacaggagcaattacaccaggaaggctttccgcaac
ctctacaataatttgtatggactaaaaaggccgaaggctctgaagcttcttggaatggag
gatgatgaaccacggtcaaaaggcaagaaaaagggcaaaaagaagaaagaggaagaggtg
gaaattgatgtggatgaccctgaggtctgtcgattcaagttccccttccatgagctgatg
ctgtgggcggtgctgatgaagcgtcagaagatggcactgtttctttggcagcgtggagag
gaagccatggcgaaagccctggtggcctgtaaactgtataaagccatggcccatgagtgc
tccgagagcgaattggtagatgacatctcccaagacctggagaacaactccaaagaattt
ggccagcttgcctacgagctgttggaccagtcgtacaagcatgacgaacaggtagccatg
aaactcctaacatatgagctggtcaactggagtaactccacctgtctgaagctggcagtg
gctgctaagcaacgtgacttcattgcccacacctgcagccagatgttgctcaccgacatg
tggatgggctgcttaaggatcggcaagaatcccggcctcaaggttattctgggaatcgtc
tttcctcctctgattctactgttggatttccgtctcgggaatgaagcatctacagacaaa
gaacaaggaaaagacaaagatgatgacacaaaatccagcaaggaccctaataatgatgca
acttcccagaagggggatgaagaggagggcagtactaatgtccacaaaatccccattgcc
aaaaggttctttgagttttataacgcgccattcaccaaattctggttcaacactatttgc
tatatgggatatttgatgttgtacaactacataatcctggtaaaaatggagcgatggcca
tctttacaagagtggacggtcattgcatacatcctcacacttggatcagaaaaaatcaga
cagatcctgatgtcagagccggggaagctgaagcagaagataagtgtgtggctggaggag
tactggaacatcacagacctggctgccatttgcaccttcctttttgggctaatgctacgg
ctgcagcatgaaccttacttgggctacggcagagtcatctactgcatagacatcatcttc
tggtacattcgcgtattggacatctttggagtcaacaaatacctgggaccctatgtgatg
atgatagggaagatgatgatagatatgatgtactttgtggtgatcatgctggtggtgctt
atgagcttcggggtggctcggcaagccatccttcaccctgatgaggagccaacgtggcgc
ctggccagaaacattttctacatgccctactggatgatctacggagaggtttttgcggat
tcgatagacctctatgcgatggaaatcaaccctccatgtggtgaacatttatatgacgag
gatgggaagaaactgcctccatgcatccctggtgcctggctcacacctgccatcatggcc
tgttaccttctcgtggcaaacattcttctggttaacctgctcattgccgtgttcaacaac
actttctgtgaaatcaagtcaatttccaaccaggtgtggaagttccagagatatcagctg
atcatgacgtttcatgaccgtcccatcctgccgccacctctcatcatcttcagccacctc
tacatcctcttcaacaggctgtttcggcggtgtgccaaaaagaaacaagagggagagctg
gatgagaaggaccgcggactcaagctcaggctgaatccagaggagctaaaatgtctgtat
gagtttgaagagcagtgtgtggaggaatatttccgtgagaaagaggacgaacagcagtcc
tccagtggcgaacgcatcaaagttacctcagaaagagttgagaatatgtccatgcgtctg
gaggaggtaaatgagagggagaacactatgaaggcctccctgcagacagtggatctgcgc
ttggcacagctggaagagattcacggacggatggcagttgctctggaaaagcttgcaggg
gtggacaggctggagctgaccagaacctattcacgaaactcctccgccggtgacccctct
tccttactgcgccagggcagtatcaacagtgccgatggttacagtctgtaccgcttccac
atggacatggaggagtttgcatcgaaacagaaggacacggacgagacaactaaaactgcc
gtagaaagacagaagagtctgcgacaagcctccagtatttgtactctcaacccaaaggaa
ggtggtcagaccttagaggttggtggtgtggagagatcacgaccaagttcatgtgtggac
attctcatatctccgtgtgaacaaaagcctgtctctgcagcgtcgagtcaagagacctta
tccaacctaaaacatggcagcacagtgctgctagatagactaaagccttgttctccacca
aaaagaactaaatccttgagatactatccggtcgaaaaccaacccacttctcctttgaca
aagaggagggctatgagcaccatcattgtcagcccgcctgatgaactcgaggaagtagat
gagcctacaaagaagagccaactgccatctgcaacctcctcctccccaaagaggactaaa
tcattgagatatataccttctgaaatccaaagccagacttcccctatcacaaagaagaga
gctatgagcagcatcatctacaacccatccgaggcaggtgacgatgtgcaaactgcagac
tacaagtcagtactggaacagatcactaatacaccaaatcagtggccggcaaagttggag
taccaggtgcacccgagcactattggtcacatgcctaaagtgtcaacagtcagagctctc
tcccagcagtttgaagctagcactgcacctacagagcttaaaaaagatgagaatcagatg
gatcatattcctttagaaagcgagggagctggtccagcagaggagcccgcagctaaccaa
accaagatgaaggccaagcggaatctctcagacactaccgggtatctgactgtagctgat
gaaaagtatttcccgtctcaaagatcgcagagctttaatgccagcgagaggaaagaaaag
gttgttagccatgagcccagagcctcaagcagcgagagagacctggttgaagcctgcagg
ggagcaggggatgaagcagggaagaagatggaggtggagaagaaagaggatgatccacag
gaaaataaataa
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