Anoplopoma fimbria (sablefish): 129108706
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Entry
129108706 CDS
T09102
Symbol
sntb2
Name
(RefSeq) LOW QUALITY PROTEIN: beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129108706 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
129108706
NCBI-ProteinID:
XP_054476582
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Position
19:complement(15125684..15156137)
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AA seq
594 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETLTLTAEAEATGHGANHWDYNNSSAGLRN
GMSNGNDPGTSPGNPGRGLSPGQDQVQNQNQXGKGRSGSPGRGGVSRGQYDGNYGPNSSG
KYPNNGTNSEFGSPGSSYGSPGSSFGSRQGEGPVSLDCSSEAVRKVRVVKQESGGLGISI
KGGRENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEV
TLEVKYIREVSPLFKKPSLVADLPWDGVRPQSPSYSGSEDSGSPKHCGPSSSKDRKVISL
KMCFISRNLTMPDLENRLLELHSPDGQHTVVLRCKDGPTANSWFTAVHTNIAALLPHTLA
HVNAYLGATSSSTTHPHLKHIGWLAEQVQLEGGRQQYKPVVMALTEKDILLFESVPWSRE
SWSMPLLTHPLLATRLVHSGSARGSPAQGSDLVFATRTGTGRGIESHIFRVETHWDLSSW
TRALVQGAHAAAELIKEVSIGCTLNRQDIRLTLHYEKGFTVMREPAEPAGGAVLYRYPYE
KLKMSADDGIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctggaccagagcggacaaaaacggtcaactggaccttctgctccgggaccgc
tggatccgagtggccgcagaactcacccgagaaacactgactttaacggccgaggcggag
gcaaccgggcacggggcgaatcactgggactacaacaactcttcggcgggcctgcgaaat
ggcatgtcgaacggaaacgacccgggaacaagtccggggaaccctggccgcggtctgtcc
ccgggtcaagaccaggtccagaaccagaaccagnnggggaaggggcgcagcggcagccca
gggcgcgggggtgtcagccggggtcaatacgacggcaactacggtccgaacagctccgga
aagtacccgaataacggcacaaactctgaatttggaagccccgggtccagctacggcagt
cccgggtccagcttcgggtcgagacagggcgagggtcccgtcagcctggactgctcctcg
gaggcggtgcggaaagtccgagttgtcaaacaggagtcaggcgggctggggatcagtatc
aaaggtgggcgcgagaaccggatgcccatcctcatctccaagatcttcccggggctcgcc
gccgaccagagccgggctctccgggtgggcgacgcaatcctgtcggtgaatgggaacgac
ctccgggaggcgacgcacgacctggcggtccaggcgctcaagaaggcggggaaagaagtg
acgctggaggtgaagtacatccgcgaggtctccccgctcttcaagaagccgtccctggtg
gccgacctgccgtgggacggcgtccgaccgcagtcgcccagctacagcggcagcgaggac
tccgggtcgcccaaacactgcggtccctcctcctccaaggacagaaaagtcatcagcctg
aagatgtgcttcataagcaggaacctcaccatgcccgacctggagaacagacttttggag
ctccactccccggacggccagcacacggtagtgctgcgctgcaaagacggccccactgcc
aactcctggttcaccgccgtccacaccaacattgccgctctgctgccgcacaccctggct
cacgtcaacgcttacctgggggccacgtcttcgtccaccacgcacccccacctcaaacac
atcggctggttggccgaacaggtccagctggaaggaggacggcagcagtacaaaccagtg
gtcatggctctgacggagaaggacatcctgctgtttgaatcggtgccgtggagcagagag
tcctggtccatgcctctgctcacacacccgctgctagccacaagactggttcattccggc
agcgcccggggttcgcctgcccagggttcagacctggtgttcgccactcggacgggcact
gggcggggcatcgagtcccacatcttcagagtggagacccactgggatctgtcatcatgg
acacgagccctcgtgcagggggcacacgctgctgctgagctcatcaaagaagtctccatt
ggttgcacgttgaacaggcaggacatccggctcacgctgcactatgagaagggcttcacg
gtgatgagggagccggcggaaccagcggggggcgctgtgctgtacagatacccctacgag
aagctcaagatgtctgctgacgatgggatacgcaacctctaccttgactttgggggtcca
gagggagagatggtgtttgacctccactcgggtccaaagccggtggtgttcgtcctccac
tccttcctgtcagccaagctcacccgtatgggcctgctgacgtga
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