Anoplopoma fimbria (sablefish): 129108808
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Entry
129108808 CDS
T09102
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129108808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129108808
04131 Membrane trafficking [BR:
afb04131
]
129108808
03029 Mitochondrial biogenesis [BR:
afb03029
]
129108808
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129108808
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129108808
mRNA cycle factors
P-body specific factors
129108808
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Myosins
129108808
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129108808
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129108808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
129108808
NCBI-ProteinID:
XP_054476704
LinkDB
All DBs
Position
19:complement(18144067..18158675)
Genome browser
AA seq
1821 aa
AA seq
DB search
MAASELYAKYARVWLPDAAEVWKSAELTKDYSPGDLKLTLQLEDGTEVEHKIDPRTNNLP
PLRNPNILVGENDLTALSYLHEPAVLHNLKVRFIDSKSIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSCSSSEASVEERVLASNPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHCIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKAFKLGCADDFHCTNQGQSPVIDGVD
DAKEMCNTRRAFSMLGIGESDQMAIYQILAAILHLSNVEVKDQSADKSSILPDSVHLMVF
CELMGVPCEEMAHWLCHRKLKTTTETYVKSVSKMNAVNGRDALAKHIYARLFSWIVCSIN
IALKSAAKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFDDNQPCIDLIEAKLGVLDLLDEECKMPKGSDDTWAQKLYNTLLKQNAHFDK
PRLSNRAFIIHHFADKVEYQCEGFLEKNKDTVNEEQINVLKKSKVDWLLKLFQDDEKAAS
STNKRTSVTGRAGQAQRDNKKTVGLQFRQSLHLLMDTLNATTPHYVRCIKPNDNKSPFYM
DPVRAVQQLRACGILETIRISAAGFPSRWTYQEFFSRYRVLMKQKDILHDRKQTCKNLLE
KLVKDKDKYQFGKNKIFFRAGQVAYLEKLRSDKLRMACVRIQKTIRCWLARKKYLRMRES
AITIQRHVRGHQARCYVKFLQRTRAAVIIQRNVRMWVTRTCYQQLRSAAITIQCFLRTYM
ARNEYYKLVFEQKAVVIQKWVKGWLARQHYKRTMAAIVLLQSCVRRMKAKKELKTLKVEA
RSVERFKKLNIGMENKIMQLQHKINEQQKDNRELSERLNVMEKTQTTEREKQNRETENLR
RSGQEAKAKAATLPSLLEQLSFLQHELENTRREKQDLEEHTKVYKEQTQQVVEDLNMKNS
LLNSEKDEMNQRILEQANQLTEIKTNVENAKQLEKDLTEERSRYQSLLSEHLHLEERHRD
VKEEMNLSLSSSKSSHKRTDSNYSSNSSEFSQSLGSTEGENSSIQTEDETQATVDLPVLL
KLQKRVKELEQDKQSLWQQLDNREEDQQEKAKEVEEQRTVGRAELDLETLKRQELESENK
KLKQDLNELRKSLTNENSESAPPIPGSLPYNILLEHLSSSNEELDMRKEEVLLLRSHMVR
QEALKHKDSVLGEGVKLDFSEMSSFQDVDRSTNIHTLNEDGELWLAYEGLKETNRILEYQ
MQEQKRAHHEENRKLLSEVNKFKGEKEQQQKLLNQSLLLPEDARVEASLKHEMTRLTNEN
LELMEQQEQQAETIRKLKKQLKLYIKKVEHFEASAQQKNKAPVMAAPVRAVNITRKEKEY
RGMLEYREGDETRLLKKLVVDLKPRGVAVSFIPGLPAYIIFMCVRYADNVNDDQRVSTLL
NSTISSIKGVIKRRGNDFEVVSFWLANTCRLMHCLKQYSGDEVFITHNTAKQNEQCLANF
ELSEYQQVFGDLAIQIYRQLIKCMEENLQPLIVASMLEHETIQGVLGSKPTGLRKRSSNS
QEQTITVEVLLQRLSVFHTTMSQHGMDLDLIKQIVKQQFYIICAVTLNHLLLRKDMCSWS
KGLQIRYNVWQLEEWLVERELADCGAKETLDPLVEAAQLLQINKKTEADAQAICTMCSAL
TTAQIVKVLTLYTPVIEFEERVTTAFITIIKNLLKDRVETTTLMMDTKKIFSVTLPFTPT
SVALETIQIPASLNLGFLARI
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgagctgtacgctaagtatgcccgtgtatggctgccagatgcagcagaa
gtgtggaagtcagcagagctcaccaaagattacagtcctggcgacctgaagctgactctg
cagctggaggatggcacggaggtggaacacaaaatagacccccgaaccaacaacctgcct
ccactaagaaaccctaacatcctggtaggggaaaatgacctcacagctctcagctacctc
cacgagcctgcagtgcttcacaaccttaaagtgcgctttatcgactccaagtcgatttac
acatactgtgggattgtcctggttgccatcaatccgtatgagagcctgcccatctatgag
gctgacatcatcaatgcctacagcggacagaacatgggggacatggacccccatatcttt
gcagtagcagaagaagcatacaaacagatggccagagatgaaaggaaccagtccatcatt
gtgagtggtgaatcgggagctggcaaaacagtctctgctaagtatgctatgcgttacttt
gccacggtcagctgctcctctagtgaagccagtgtggaggagcgagtcctggcctccaac
cccatcatggaggctcttggcaatgcaaagacaacaaggaatgacaacagcagtcgcttt
gggaagtacattgagattgggtttgacaagaagcattgtataattggggccaacatgaga
acctacttactggaaaagtctagagttgtgtttcaggctgacgaagaaaggaactaccat
atattctaccagctgtgtgcctcttcacatttaccagagttcaaagccttcaagttaggt
tgcgcagatgacttccactgtactaaccagggtcagagcccagtcatagatggagtggat
gatgccaaagagatgtgcaataccaggagggctttctcaatgttaggaatcggtgaaagt
gatcaaatggccatttaccaaattctggcagctattcttcatcttagcaacgtggaggtg
aaagatcagtcagcagacaaaagcagcatcttgccagacagtgtccacctgatggtgttt
tgtgagttgatgggtgtgccctgtgaagaaatggcccactggttatgtcaccggaaactc
aagacgaccacagaaacctatgtcaagtccgtctccaaaatgaatgcggtcaatggccgt
gatgccttagccaaacacatctatgccagactctttagctggattgtgtgcagcattaac
attgccttgaagtctgcagcaaagcaacactccttcattggtgtgctcgacatttacggg
tttgaaacatttgatgtcaacagctttgaacagttttgcatcaattatgccaacgagaag
cttcaacaacagttcaacctgcatgtcttcaaactggagcaagaggagtacatgaaagag
gagatcccttggacattgatcgactttgacgacaaccagccgtgcattgatctgattgag
gccaagctgggggttctggaccttctggatgaagagtgcaaaatgcccaaaggctctgat
gacacatgggcccagaaactgtacaacaccctcctgaagcagaatgctcactttgacaaa
cccaggttatcaaatagagctttcatcatccaccactttgcagacaaggtggagtaccag
tgtgaaggtttcctggagaaaaacaaggacacagtcaatgaggagcagataaatgtgctg
aaaaagagcaaggttgattggctgctgaagctgtttcaggatgatgagaaggcagcaagt
tctacgaacaagcgtactagtgtcactggaagggcgggtcaggctcagcgggataacaag
aagactgttggacttcagtttcgacagtctctacatttgctgatggacacactaaatgct
acgactcctcactacgtacgctgcatcaagccaaatgacaacaaatctcctttctacatg
gatcctgtgagggcagtgcagcagcttcgagcatgtggcatcctcgaaacaatccggatc
tcagcagcaggcttcccatctagatggacctatcaggaattcttcagtcgctatcgggtg
ctcatgaagcaaaaggacatccttcatgacagaaaacaaacatgcaaaaacctccttgaa
aaacttgtaaaggacaaagataagtatcagtttggcaaaaacaagatcttcttcagggct
ggtcaggtggcttacctggagaagctgcgttctgataagctgcgaatggcttgtgtccgc
atccagaagactatccgctgctggctggcccgcaaaaagtacctgagaatgagggaatct
gctatcaccatacagagacatgtacggggtcaccaggcacgctgctatgttaagtttctg
caaagaaccagagcggctgttatcattcagcggaatgtgcgtatgtgggtgaccaggaca
tgctaccagcagctgcgctctgcagctatcaccattcagtgcttcttgaggacctacatg
gctagaaatgagtactataagttggtgtttgagcaaaaagctgttgtcatccagaaatgg
gttaaaggctggctggctcgacagcattacaaacgcaccatggcagccatcgtcctgctg
cagagctgtgtgcgtcgcatgaaggccaagaaagaattaaagacgctgaaagtggaggcc
cgctctgtggagcgtttcaagaagctcaacattggcatggagaacaagattatgcagttg
cagcacaagataaacgagcagcaaaaagacaacagagagctcagtgaaaggctgaatgtt
atggagaagacccagacgacagagagagagaaacagaacagagagactgaaaacctacgt
agatcagggcaggaggccaaagccaaggcagcgacgctcccctcactactggagcagctc
tccttccttcagcacgagctggaaaacacccgcagagagaaacaagacctggaggagcac
acaaaagtctacaaggagcaaacacaacaggtggtagaagaccttaatatgaagaacagc
ttgttgaacagcgagaaagatgaaatgaaccaacgaatcctggaacaagcaaatcagtta
acagaaatcaaaaccaacgttgagaatgctaaacagctggagaaggacttaactgaagag
cgctctcgctaccagagtcttctgagtgaacacctgcatctggaggagcggcacagagac
gtgaaggaggagatgaatctcagccttagttcaagcaaatctagtcacaagaggacagac
tccaactacagcagcaactcatctgagttcagtcagagcttaggctccactgagggggaa
aacagctccatacaaacagaggatgagacccaggcgacggtggacctgccggtgctactg
aagctccagaaaagagtgaaggaactggagcaggacaaacagtcactctggcagcagctg
gataacagagaggaagaccaacaagaaaaggcaaaagaggtggaggagcagagaactgtt
gggagagcagaactggacctggaaacactaaagcggcaagaactggagtctgagaacaag
aagttgaagcaggatctaaatgagctgagaaagtctctgaccaatgagaatagtgaatcg
gcgccccctatccccggctctctgccctacaacatactgctggaacatctcagttcttcc
aatgaggagctggatatgcgaaaagaggaagtgctgctgctccggtcacacatggtccgc
caagaggctcttaaacataaggactctgtgctcggggaaggtgtgaaattagattttagt
gaaatgtcttcatttcaagatgttgacaggtccactaacatccatacactcaatgaagat
ggagagctgtggctggcgtatgaaggcttgaaagagaccaatagaattttggagtaccag
atgcaggagcagaaacgtgctcaccacgaggagaataggaagctgctcagtgaggtgaac
aagtttaagggtgaaaaggagcaacagcagaagctgctgaaccagagcctcctcctgcct
gaagatgcccgtgttgaggcgagcctgaagcatgagatgacccggctcaccaatgagaac
ctggaactcatggagcagcaggagcaacaagccgaaacgatacgcaagttgaaaaaacaa
ctgaaactttacattaaaaaagtggaacattttgaagcgagtgctcagcaaaagaataaa
gcccctgtgatggcggctcctgtcagagcggtgaatatcacccgcaaggagaaagagtac
cggggcatgttggagtacagggagggtgacgagacccgcttgcttaagaaactggtcgta
gatctgaagcctcgtggtgtagcagtcagcttcattcctgggcttccggcttacatcatc
ttcatgtgcgtaagatatgcagacaatgtgaatgatgaccagagagtcagcactctgctc
aattccaccatcagcagcatcaagggggtcattaagaggagaggaaatgattttgaagtg
gtgtctttctggctggccaacacgtgcagattaatgcactgtctgaagcagtacagtgga
gatgaggtcttcataacgcacaacacggccaagcagaatgagcaatgcctcgccaacttt
gaactgtctgagtaccagcaggtttttggtgatctagcaatccaaatttaccgccagctc
atcaaatgtatggaagaaaacctgcagcccctgatcgtggcaagcatgctggagcacgag
accatccagggggttttggggtccaaacccacaggcctcaggaagagaagcagcaattcc
caagagcagacaattacagtggaagtcctgctgcagcgactcagcgtcttccacaccacc
atgagtcagcacgggatggacttggacctcattaaacagatagtcaagcagcagttttac
atcatctgtgcggtcacactcaatcacctgctgctgcggaaggacatgtgctcctggagt
aaaggcctgcagatcaggtacaatgtttggcagttggaggagtggctggtggagagggag
ctggcagactgcggtgccaaggagaccctggatcctctcgtagaggctgcacagcttctg
cagatcaataagaagactgaggcagacgcccaggccatttgcaccatgtgctctgccctc
accacagcacagattgttaaagtgttgaccttgtacaccccagtgattgagttcgaagag
cgagtgacaaccgctttcatcacaattattaaaaaccttttgaaagacagagtggagaca
accacattgatgatggacactaagaagatattttcggtcaccctccccttcacacccacc
tctgtggctctggaaaccatccaaatccctgctagcctcaatctgggcttcctcgcccgc
atctag
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integrated database retrieval system