Anoplopoma fimbria (sablefish): 129108822
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Entry
129108822 CDS
T09102
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129108822 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129108822 (myo5aa)
04131 Membrane trafficking [BR:
afb04131
]
129108822 (myo5aa)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129108822 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129108822 (myo5aa)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129108822 (myo5aa)
mRNA cycle factors
P-body specific factors
129108822 (myo5aa)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Myosins
129108822 (myo5aa)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129108822 (myo5aa)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129108822 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
DUF5382
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
129108822
NCBI-ProteinID:
XP_054476719
LinkDB
All DBs
Position
2:12189840..12242396
Genome browser
AA seq
1843 aa
AA seq
DB search
MAASELYTKRARVWIPDAEEVWKSAELTKDYKNGEASLQLALEDGTNIEHKLDPKTKNLP
YLRNPDILVGENDLTALSYLHEPAVLHNLKVRFMDSKLIYTYCGIVLVAINPYETLPIYG
SDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGTTSEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDTRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEYKALKLSSANDFLYTRQGRSPVIVGVD
DTKELSTTRNAFTLLGINESNQMGLFQVLAAILHLGNVEIKDRDSDSSVIPPNNHHLTAF
CELVGVTYQDMSQWLCHRKLKTATETYIKTLPRLQATNARDALSKHIYAKLFNWIVEHVN
KALITNIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMRE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEK
PRMSNRAFIIQHFADKVEYQCEGFLEKNKDTVNGEQINVLKASKFHLLVELFQDEEKATS
PTGQVPGTGGRTRLSIKPDKGRDKSSKEHKKTVGCQFRNSLQMLMGTLNATTPHYVRCIK
PNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLTD
KKLTCKNVLEQLVQDQDKYQFGKTKIFFRAGQVAYLEKLRAEKLRVACIRIQKTIRCWLV
RKKYLRKRSAAITIQRFTRGYQARCLAKFMRRTQAATVIQKYQRMCVERKRYRQKQAAAL
VMQTILRAYMARQKYQALLRESKMVIIQKRVRGWLARCWYKRCLVSLVYLQCCFRRMKAR
RELKKLKIEARSVEHFKKLNKGMENKIMQLQRKLDEQTKETRLVNERLVGLENTYTNESE
KMRVELTRLRRAEEDAKNKGNQVTSLLEELEKLRKELSSTQKEKKTIEDWAQTYRSEMEK
MVSELKDQNGSLKKEKDDLNRMILEQSQQMTEKMARSIAEETQQLETNLNEERSRYQNLL
TEHLRLEEKYDDLKEEMVSSNVSKPGHRRTDSTHSSNESEYTYNSEYAELEDGSRAAEDV
TRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFQRARARDDVEFKKARGAELEYES
LKRQELESENKKLKHDLAEIRQSLMGKAATGAGTPGSPAYKVVLEQLNASCEELEVRKEE
VLILRSQLVSQKEAMHHKETMTEPSVYVEDVSKLKDAGELKQAYVGLKDTNRLLEHQLQT
QRRGYDNEVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLEL
LAEDPTASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQTEGQTS
PGQMVDEPIHPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYI
LFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLANTCRFLHCLKQYS
GDEAFMKHNTQRQNEHTLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIVSGMLEH
ETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQVVKQQ
FYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQQEEWLRDKGLMMCGAKETLEPLIQAAQ
LLQVKKKTDEDAEAICSMCLALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQTRLRDRC
ESPQLLMDTKMIYPVTFPFSPSSLALETIQIPSSLNLGFLTRV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagctgtacacaaagcgtgctcgggtgtggatccccgatgcagaggag
gtgtggaagtctgccgagctgaccaaggactacaaaaatggcgaagcctccctgcagctc
gcgctggaggatggaacgaacattgagcacaaactggaccccaaaactaagaacctgcct
tacctgcgaaaccctgacatcctggtgggcgagaatgacctcacagcactcagctacctc
cacgagccggccgtgctgcacaacctcaaggtccgcttcatggactccaagctcatctac
acttactgtggaatcgttctggtggccatcaacccgtatgagacgctgccaatctacggc
tcggacatcatcaatgcgtacagcggtcagaacatgggagacatggacccacatatcttc
gctgtggcagaggaggcttacaaacagatggccagggacgagaggaaccagtcgatcatt
gtgagcggggagtccggagcaggaaagacggtgtcggccaaatacgccatgagatacttt
gctacggtcagcggcaccaccagcgaggccaacgtagagcagaaagtcttggcttccaac
cccatcatggaggccatcggaaatgcaaagaccacccgaaatgacaacagcagtcgcttt
gggaaatacatcgagatcggcttcgacacccgctaccgtatcatcggcgccaacatgaga
acatatctgctagagaaatcacgagtggtgtttcaggctgacgaggaaaggaattatcac
atcttctatcagctctgtgcatcttcccatctgcctgagtacaaggcgctgaagctgagc
agtgcaaacgacttcttgtacaccaggcagggccgcagccccgttatcgtcggagtggac
gacaccaaggagctgtccaccactcgcaatgccttcacattgctcggtattaatgagtcc
aatcagatgggcttgttccaggttttggctgctattcttcatctgggaaacgtggagata
aaggacagagactcagacagcagcgtcattcctcccaacaatcaccacctgacggcgttc
tgcgagttggtgggcgtgacctaccaggacatgtctcagtggctgtgccacaggaagctg
aagacggccacagagacgtatatcaagaccctgccccgcctgcaggccaccaacgcccgt
gacgcgctgtcaaaacacatctacgccaagctcttcaactggattgttgagcatgttaac
aaagccctaatcaccaatatcaaacagcactccttcatcggggtcctcgacatctacggg
tttgaaacatttgagatcaacagctttgagcagttttgtatcaactacgccaacgagaaa
ctccagcaacagttcaacatgcatgtgttcaagctggagcaggaggagtacatgagggag
cagatcccctggactctgattgacttctacgacaatcagccctgcatcaacctcatagag
gccaagatgggcatcctggacctgttggacgaggagtgcaagatgcccaaaggttcggat
gattcttgggctcagaaactctacaacacccacctaaagacctgctccctcttcgagaag
ccgcgcatgtccaaccgcgctttcattattcaacattttgctgacaaggtggagtaccaa
tgtgaaggtttcctggagaagaacaaagacacggtgaacggagaacagatcaacgtgctg
aaagccagcaagtttcacctgctggtggagctgttccaggacgaggagaaagccaccagt
cccactggtcaggtccctggcaccggagggaggacccgcctcagcatcaaacccgacaag
ggccgtgacaagagcagcaaggagcacaagaagaccgttggatgccagtttcgtaactcg
ctgcaaatgctgatgggtactttgaacgcaacgaccccgcactatgtacggtgcatcaaa
cccaatgacttcaagttggccttctcgtttgatcctaaacgtgcggtgcagcagctcaga
gcctgtggtgtcctggaaaccatccgcatctctgctgcaggtttcccatccagatggacg
taccaggagttcttcagccgttacagagtgctgatgaagcagaaggatgtgttaactgac
aagaagttgacctgcaaaaatgttctggagcaacttgtgcaggaccaggacaaataccag
tttggtaagaccaagatcttcttcagggccggccaggttgcctacctggagaagttgagg
gctgagaagctgcgtgtggcctgcattcgcatccagaaaaccattcgctgctggctggtg
cgcaagaagtatctgcgcaagcgcagcgctgccatcaccatccagaggttcaccagagga
taccaggctcgctgcctggccaagttcatgcgtcgcacgcaggcggccaccgttatccag
aagtaccagcggatgtgcgtggagaggaaacgctacagacagaagcaggctgctgctctg
gtcatgcagacgatcctcagagcttacatggcccggcagaagtaccaggcgttactgcgg
gagagcaagatggtgatcattcagaagcgcgtccgtggctggctggctcggtgctggtac
aagcgctgcctcgtctccctcgtctacctgcagtgctgcttccgcaggatgaaggccagg
cgcgagttgaagaagctgaagatcgaggctcgctcagtggagcacttcaagaagctcaac
aaaggcatggagaacaagatcatgcagctgcagaggaaactcgacgagcagaccaaggaa
acccggttggtcaacgagaggctagtcggtctggagaatacctacacaaacgagagcgag
aagatgcgtgtcgagctgacccggctgcgcagggcggaggaggatgccaagaacaaaggc
aaccaagtgacctctctgctggaggagctggagaagctgaggaaggagctgagttccaca
cagaaggagaagaagaccatcgaggactgggcgcaaacctacaggagcgaaatggagaaa
atggtctcggagctgaaggatcagaacggctctctgaagaaagagaaggacgacttgaac
aggatgattctggaacagagtcagcagatgacagagaaaatggcccgttcgatcgcagag
gagactcagcagctggagaccaatctgaacgaggagcgatctcgctaccagaatctgctg
acagagcaccttcgcctcgaagagaaatacgacgacctgaaagaagagatggtttcctcg
aacgtctccaagcctggccacaggagaacagattccacccacagcagcaacgaatcagag
tacacatacaactcagagtacgccgaattggaagacggttcccgtgccgccgaggatgtg
acacgaggaatagacacctcgctgaccctcaagctgcagaaacgtttaacagaactggag
caagaaaagcagtcgctgcgcaacgagctggaaaacaaagaggaccagttccagcgggct
agagccagggatgacgtagagtttaaaaaggctcgtggggcagagctggagtacgagtcc
cttaagcgtcaagagctggagtcagagaacaagaaactgaaacatgacctggcggagata
aggcaaagcctgatgggtaaagcagctacaggtgctgggaccccgggctccccggcctac
aaggtggtcttggagcagctcaacgcctcctgcgaggaactggaggtccgtaaggaggag
gtgctgatccttcgctcccagctggtcagccagaaggaagccatgcaccacaaggagacc
atgaccgagccttcagtctatgtcgaggatgtgtccaaactgaaggacgctggtgaactc
aagcaagcttacgtaggcctcaaagacaccaacaggctcctggagcaccagctgcagact
cagcggagaggatacgacaacgaggtggagtcgttgcgcggcgagctgcagaatgtcaag
gaggagaacaaccgtcagcagcagctcttggcccaaaacctgcagctgcctccagaggcc
cgaatcgaagccagtctgcaacacgagatcacccggctcaccaacgagaacctggaactc
ctggctgaagaccccacagcatcccgagaggctcgagtcatcattttacgacggatggtt
gatctaatggagcagctggagaagcaggaccgaaccatccgcaagctcaagaagcagctg
aaggtttactccaagaggatcggagagatgggggcgggtcaaaccgagggacagacgtcc
ccgggacagatggtggacgagccgattcatcccgtcaacattcctcgcagggagaaagat
ttccaagggatgctggagtacaagaaggaggatgagctcaaactggtcaagaacctcatc
cttgagctgaagcctcgtggtgtggccgtgaatctgatcccaggtctgccggcctacatc
ctgttcatgtgtctgagacatgcggactacgtcaacgatgaccagaaggtccgcaccctt
ctcacctcaaccatcaacagtattaagaagatcctaaagaaacgaggagacgactttgag
acggtctccttctggctggcgaacacctgccgcttcttacactgtctgaaacaatacagc
ggagacgaggcgttcatgaagcacaacacgcagaggcagaatgaacacactctgtccaac
ttcgacctggcagagtacagacaggtgatcagtgacctggccatccagatctaccagcag
ctgatcaaatgcatggagaacatcctccagcccatgatagtttctggcatgctggaacac
gagaccatccagggagtgtcgggggttaagcccacaggcctccgtaagcgaacatctagt
atcgcagacgagggcacctacaccctggactccatcctgcggcagctcagcgccttccac
tccaccatgtgccagcacggcaccgaccccgagctcatcaagcaggtggtgaagcagcag
ttctacatcatcggagccgtcaccctcaacaacctgctgctacgcaaggacatgtgctcc
tggagcaaaggcatgcagatcaggtacaatgtaagtcagcaggaggagtggctcagggac
aaaggtctaatgatgtgcggagccaaggagactctggagcctctgattcaggccgctcag
ctgctgcaggtgaagaaaaagaccgatgaggacgccgaggccatctgctccatgtgcctg
gccctcaccactgctcagattgtgaaggtcttgaacctctacactccagtcaacgaattt
gaggagagagtatcggtttcgttcatacgaaccatacagactcgcttgcgagatcgttgt
gagagtccgcagttgttgatggacaccaagatgatttacccggtcactttcccgttcagc
ccttcctccctcgccctggagaccatccagatccccagctcgctgaacctgggattcctc
acccgtgtctaa
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integrated database retrieval system
