Anoplopoma fimbria (sablefish): 129108827
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Entry
129108827 CDS
T09102
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129108827 (carmil2)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
129108827 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
129108827
NCBI-ProteinID:
XP_054476721
LinkDB
All DBs
Position
19:16235197..16289965
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AA seq
1853 aa
AA seq
DB search
MNSVSQNLRDQISELLKPHRVCLVTPVVLNHSGQPCGKLANRLLVLSLWRGYLVINKQPL
RVESTFSYLEICSIIIQSLREVVLVTDGHALSFSVSHVEDLEAMVSHMTATLKRVFPDSS
PGKLLKTSPPDLQQRLLTLTDAIEEQLDSRPGSCGGFCDTYAALCDFNQMPFREEIQWDV
DNIYCINNWREFNLHDFSHLDSRDLALAVAALSFNHWFTRIYCKDLKLSVDIQQQLTFVM
SRSPSLEELSLEASGLKLDFAIKMAAALREHTSSTLQSINLSSNPIEDKGVIALSQELEN
LAEGLKHLSLSRVSMTAKGLGCLSQVLSSNPLFSASLTHLDLSGNPGSLVTEDATFLFKF
LSSTNSLSHLDLSDTNCPLDTLFVSLSAGCCYKLMHLSLARNPFSHRKVQKVTRSIREFF
SQSCELKYVGLSATKLPPQALRLLLQGLATNTHLFGLELDLSSCELRSAGAQVIQEHISE
ATAIRSLDVSDNGFENDMVTLVLSIGRCHSLRHLALGRNFNMKSRALTDVLHRIVQLIQD
DECPLQSLSVCDSKLKTGMRILLSALGGHAALTEVDISGNNIGDMGAKMLAKALMTNTRL
RTLTWDRNNVTARGYQDVADALERNFTLQHVSGLADVTQSYRSNPDRTKEALHKIQQCLD
RNNQRQSERVEPQQVFRAHQSEKQVQGLCQQLEDSLKRLIHCSIQEVQADILTAHEVLHN
ARESFELLPSLYEAGRKCSSDGDLVNCILTDTATALTNEFNRSIQELAQGLIRGAEATCP
RVIQRSSVFECLSECVSKRSRQTHTFLRSTLVENTGPIISNRLRELRQTLSVSLAESIIE
QVLQDLTTAQDKMDCLIKENSCTALNINIPELRLVDSDFPIDDYSPAFWRNSFHSKSLRP
APSIKSLLDADWEQQNRDGGPERERGGGTGEQGGGGRCGLPRSPTATPLSVRFSSPSPSL
SPSPPELRGRRRQREGEVAAADAAAALSGASGASLIPPPGLPLRYSVSARAAEEEAAGRG
GSPRRQAPFPGCGPSPGPFPGSGSPASPMEPLPTQGQTLRHYTASRPRPRRTHTQPPSSR
PQEPVLKVENEASEGMGRVDEGVEEFFTKKIIPDYALKGRWEESIPAQATPPESSFTPSA
STPFSSLFDNTTPSTTITTTVTSPSAPSIDTSLTSTDVSSLSTSPTPPAPSSFPTTTLPT
KNIKKKFGDFFAFKRARAGRAAKSGGGEGGGGGEGVKVKRTSIADLIRPLREAKERERER
ERDKEREKGRGARSVEDANISNDAATTEGTVATGNHLAGDARGTMAPVKTLTMTTPSSET
TPSCPTIATSPDPNVTTLPNLEEEAAPGHAPSPAVTSPLTELEGRGMQVEEMKLGGTPYG
ERRLKVTKRSLREGKSQSLILLTGLEPEDKDDTHSKKHASESTSSFEQRLQVMLHRMGVA
KTPPADTKASQNKDEELRKANSDGAILDKPVPPPTYMKPRTMSTSSADPRHPLRALDPVR
PDPPLHPKPVLHERPVGPLPPKPAVAAKPPLPTPASPAGMGSRPSSAPPSSGSAGRVQLR
AHPPDGRPAETTAQNGSQERHQGAASAWGTELLPPAPSPWRCPSAQDRSEKAQSVTDESL
PKPRAHLKPLPQRRAVSVHEDTLAMTQELKAVLQRSPIRFRGNRGDLSTCTEDPSSGEEA
QRAQEAGDMGKQTAEDKKEAVHKEELKAERGRTGCGGTAAETKHPSPGEELTPGSGCPSS
LPRLFSPTAAPSILERPPVPPIWEKKSPSTAPQLLRTLEKLPVSPPPPGKSPSTISSGSP
ENPRVSSQGSHKKQSPGTADVRNSTQEEERAVSKQHTMKAEPADQRTEPPLSE
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtctcccagaacctacgagatcagatctcagagctgctgaagcctcacaga
gtctgtctggtgacgcctgtcgttctgaaccactccggtcagccatgtgggaaattggcc
aacaggcttttggtactgagtctatggagagggtacctggtgataaacaagcaacctctc
agggtggagagcactttcagctacttggagatttgttcaatcatcattcaaagtctcaga
gaggttgtgctggtgacagacgggcatgctctgtccttcagtgtatcgcacgttgaggat
cttgaggccatggttagtcacatgaccgccactctgaagagggttttccctgattcctca
ccaggaaagctgttaaagacgagtcctccagatctccagcagagactcctcacattgacg
gatgcgatagaagagcagctggacagtcggccgggttcctgtggaggattctgtgatacc
tatgctgctctgtgtgatttcaaccagatgccattcagagaggagattcagtgggatgtg
gacaacatctactgcatcaacaactggagagagttcaacctgcacgacttcagccactta
gacagcagggacttggctttagcagtagcagctctgtctttcaaccactggtttaccagg
atctactgcaaagacctcaaactgtcagtagacatccagcagcagttgactttcgtgatg
tccagatctcccagtctggaggagctgtcgctggaggccagtggactcaaactggatttt
gcaatcaaaatggcagctgccctgcgggagcacacctcctctaccctgcaatccatcaac
ctctccagcaatccaatcgaagacaaaggtgtcatagccctcagtcaggagttagagaac
ctagctgaaggactcaagcacctttctctgtcccgggtatcaatgactgctaaaggtctt
ggctgtctgagtcaggtgttatcctcaaatccgctgttctcagcatctctgacccacctt
gacctgtctggtaaccctggcagcctggttaccgaagacgcaacgtttctcttcaagttc
ttgtccagtactaactccctgtctcatctggacctcagtgataccaactgccctctggac
acgttatttgtgtccctgtctgctggatgttgttacaaactgatgcacctgagcctggcc
agaaatcctttcagccacagaaaggtgcagaaggtgaccaggagcattcgagagttcttc
agtcagagctgtgagctcaaatatgtgggcctgtctgcaaccaaactacctccacaagct
ctcaggttattactacagggtctggcaaccaacactcatctgtttgggcttgagttggac
ctcagtagctgtgagctgcgttctgcaggggcccaggtgatacaggagcacatctctgaa
gccacagctatcagaagtctggatgtctctgacaatggttttgagaatgacatggtaact
ctggttctgtctatcggtcgatgtcactctcttcgacacctcgcactgggaagaaacttt
aacatgaagtccagagctcttaccgatgttcttcatcgtatagttcagctcattcaggat
gacgagtgtcccttacagtctttatctgtgtgtgactccaagctgaagacgggcatgcgc
atcctgctgagcgctctgggcggccacgctgctctgactgaagtggacatcagtggaaac
aacatcggagacatgggagccaaaatgctggccaaggccctgatgacaaacactagactg
aggactctaacatgggacaggaacaatgtaactgccaggggttaccaggatgtggctgat
gctttagagaggaacttcaccctgcagcatgtgtccggcctggctgatgtcacacagagt
taccgcagcaaccctgacagaacgaaggaggccctgcacaagattcagcagtgtttagac
agaaacaaccagagacagtctgaaagagtggaacctcagcaagtgtttagagctcaccaa
tctgaaaagcaggtccagggtctgtgtcagcagttggaggacagcctcaaacgtctgatc
cactgcagcattcaggaggtgcaggctgacatcctgacagcacacgaggtgctgcacaac
gcaagggagtccttcgagctgcttccctctctgtacgaggcaggcaggaagtgttcctct
gatggagacttggtgaactgcatcctcactgacactgctactgcactgactaatgaattc
aacagaagtatacaggagttggctcaaggcctgattaggggcgcagaggctacgtgtcca
cgcgtgatccagcggtccagtgtgttcgagtgtctgtcagagtgtgtgtccaaaagaagc
agacagacacacacattcctgagaagcactctggtggagaacacagggccgatcatcagc
aaccgactgcgtgaactgagacaaacattgagtgtctctctggctgaaagcatcattgaa
caggttctacaggatctgacaacagcacaggacaaaatggattgccttataaaagaaaat
tcatgcactgctctgaacatcaacatcccagagcttcgtctggtcgacagcgacttcccg
attgatgattacagtccggcattctggagaaatagtttccactccaaaagcctgaggcct
gccccttcaattaagagtctactggatgcagactgggagcagcagaacagggatggagga
ccagagagagagaggggaggaggtactggagagcaaggaggaggaggaaggtgtggcctc
ccacggtcgccgacagcaaccccgctgtcagtcaggttttcgagcccctccccttccctg
tccccctccccccctgagctgagggggaggaggcggcagagggagggggaggtggcggca
gcggatgctgcagcagcactatcaggagcgagtggagcatcgctcattcctcctcccggt
ctccccctccggtactccgtctccgctcgagctgcagaggaggaggctgccggccgcgga
ggctcacccagacgacaggctcccttccctggctgcggccccagcccaggccctttcccc
ggttctggatcccccgcttctcccatggagcctctacccacccagggacagactctaagg
cattacaccgcctcccgtccacggccacgacgcacacacacacagcccccctcctccagg
ccgcaggaaccagttttaaaggtagagaatgaggccagtgaagggatgggcagagtggat
gaaggagtagaggagttcttcaccaagaaaatcatccctgattatgcactaaaaggccgg
tgggaggagtcaatccctgcccaagccactcccccagagtcaagcttcaccccctcagcc
tcaacccccttttcctctttgtttgacaataccaccccctccaccaccatcaccaccact
gtcacctctccctctgccccatctattgacacgtccctcacatccactgatgtttcatcc
ctctctacatcccccactccccccgccccctcttctttccccaccaccacacttcccacc
aaaaacatcaagaaaaagtttggcgacttctttgccttcaagagggctcgagccggccga
gccgccaagtcaggagggggagagggaggaggaggaggagagggggtgaaggtcaaaagg
acctccattgcagacctcattcgacccctccgcgaggccaaagaaagggagagagagagg
gagagggacaaggagagagagaaggggagaggggcgagatcagtggaggatgctaacatt
tctaatgatgccgccaccacagaaggaaccgtcgccaccggcaaccatcttgcaggcgat
gccaggggaacgatggcgcctgtcaagacattaaccatgacgacgccttccagtgagacc
actccctcttgccccaccatcgccacgagccctgaccccaacgtcaccacgcttcccaac
ctagaagaagaggcagcccccggccacgcccccagtcccgcagtcacctcccctctaaca
gagctggaggggagagggatgcaggtggaggagatgaagttgggagggactccgtatgga
gagaggagactgaaggtgaccaagaggtcactgagagaaggcaagagccagagtctcata
cttctgacgggattagagcccgaggacaaggatgacacacacagcaagaaacatgcatct
gagagcacatctagttttgaacagaggcttcaggtgatgcttcacagaatgggcgtggcc
aaaacccccccagccgacaccaaggctagccagaataaagacgaggagctgagaaaggcc
aactctgatggtgctatcctggacaaacctgttcctcctcccacatacatgaagcccaga
accatgtccacctcatcagcagaccccaggcatcctttgagagccctggaccctgtccga
ccggacccccccctgcacccgaagcccgtcctccatgagcgccccgtcgggcccctgccg
cccaaacctgccgtggcggccaagcctccgctcccaactccggcttctcctgcaggcatg
ggatctcgtccctcctctgctcctccttccagcggctcagcggggagagtccagctcaga
gcacaccctcctgatggcaggccagcagagaccacagcacagaacgggagccaggagcgt
caccagggcgccgcctcggcctgggggacagagctgcttcctccagccccgtctccatgg
agatgtcccagtgcacaggatcgctctgagaaagcacaatcagtgaccgacgagagtctt
cctaagccacgcgcacacttgaagcccctcccacagcgcagagccgtgtccgtccatgag
gacactctggccatgacccaagagctgaaggccgtgttgcagagatcccctatccgtttc
cgtggcaacagaggggacctatccacctgcactgaagatccatctagtggggaagaagca
caaagagctcaggaggccggtgacatggggaaacagacagctgaggacaagaaggaagct
gtccacaaggaggagctgaaggcagagcgaggaaggacgggctgtggagggacagcagct
gagaccaagcacccttctccaggagaagagttgaccccaggctcagggtgtccctcctcg
ttgccccggctcttcagtccgaccgcagcgccgtccatcctggagaggcctcctgttccc
cccatatgggagaaaaagagccccagcacggccccgcagttgctccgaactctagaaaaa
ctgcctgtgtccccaccgcccccaggaaagagccccagcacaatctcatcaggatcgccg
gagaacccccgagtgagctctcaagggtcccacaagaagcagagccccggcacagcggac
gtgagaaacagcacacaggaggaagagagggccgtctctaaacagcacacaatgaaggca
gagccagcagaccaaagaactgagcctcctctgtctgaataa
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