Anoplopoma fimbria (sablefish): 129108884
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Entry
129108884 CDS
T09102
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03320
PPAR signaling pathway
afb04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129108884 (pparab)
03320 PPAR signaling pathway
129108884 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129108884 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129108884 (pparab)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129108884 (pparab)
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
129108884 (pparab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129108884
NCBI-ProteinID:
XP_054476782
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Position
19:complement(21446385..21469190)
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCADDDFMGGMEELQDISQSINNHALSSFDVPEYQSSS
NGSEGSTVLDALTPASSPSSVVYGLAAGQEDFSSASSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVGDPHVADQKTLARQIYEAYLKNFNMNKAKARTILTGKTTTPPFV
IHDMETLQLAEQTLVAKMVGSAGTLKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
CLDLNDQVTLLKYGVHEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPFSEMMEPK
FQFAMKFNAMELDDSDLALFVAAIICCGDRPGLVNVEHIERMQENIVQVLQLHLLANHTD
NSFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccatcccccttcgcccctggaggactcggtgctgggc
agccccctgtgcgccgacgacgacttcatgggcggcatggaggagctccaggacatctcc
cagtccatcaacaaccacgccctcagctcctttgatgtcccagaataccagtcctccagc
aatggatcggaaggttccacagttttagacgccctgacgccagcatccagcccgtcgtcg
gttgtctacgggttggcagcgggccaggaggacttctcatctgcctcctcgtcgctcaat
ctggagtgtcgagtttgtgctgaccgcgcctcgggctaccactatggagtccacgcctgc
gagggctgcaagggtttctttcggcggaccatccgtctgaagctggagtacgacaagtgt
gagcgtcgctgcaagatccaaaaaaagaaccgcaacaagtgccaatactgccgcttccag
aagtgcctgtcggtgggaatgtcccacaacgccatccgttttggccggatgccccagtcg
gagaagctaaagctgaaggcggagatggtaacgggggacagggaggtgggagacccccac
gtggccgaccagaagacgctggcccggcagatttatgaggcctacctcaagaacttcaac
atgaacaaggccaaggctcgaaccattctcaccggcaagaccaccacacctcctttcgtc
atccatgacatggagaccctccagctggcggagcagacgctggtggcaaagatggtgggc
tcagcgggaacgctgaaggacagggaggcagaagttcggatcttccactgctgccagtgc
acgtcggtggaaaccgtcaccgagctcacagagttcgcaaagtccgtccccgggttctcg
tgcctggacctcaacgatcaggtgactcttttgaaatacggcgtgcacgaggccctcttt
gccatgctcgcctccagcatgaacaaggacgggcttcttgtagcgtacggctcaggcttc
atcaccagggagttcctcaagagcctgcggcggccgttcagtgagatgatggagcccaag
ttccagtttgcaatgaagtttaacgccatggagctggacgacagtgacctggctctgttt
gtggctgctatcatctgctgtggagaccgcccaggcctggtgaacgtggagcacatcgag
cgaatgcaggagaacatcgtgcaggtgctacagctccatctgctggccaatcacaccgac
aactctttcctcttccccaagcttctgcagaagctggcggacctccggcagctagtcact
gagcatgcccagctggtgcaggagatcaaaaagacggaagacacttcgctgcacccactc
ctgcaggagatctacagagacatgtactga
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