Anoplopoma fimbria (sablefish): 129109085
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Entry
129109085 CDS
T09102
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
129109085 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
afb03051
]
129109085 (psmc4)
Proteasome [BR:
afb03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
129109085 (psmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
nSTAND3
RuvB_N
AAA_22
DUF815
NPHP3_N
AAA_28
RNA_helicase
AAA_14
Mg_chelatase
TIP49
NTPase_1
NACHT
TsaE
ATPase_2
AAA_3
AAA_lid_PRS2_C
AAA_7
NB-ARC
AAA_33
CCDC136_middle
Parvo_NS1
AAA_17
AAA_18
AAA_25
IstB_IS21
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
129109085
NCBI-ProteinID:
XP_054477000
LinkDB
All DBs
Position
20
Genome browser
AA seq
417 aa
AA seq
DB search
MEDIVAVEKSPEEMPAILTSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgtggccgtagagaagagcccggaagagatgccggccatactgacctcc
agaccccagactggtctttctttcctggcaccagaaccagaagatcttgaggacctttac
agcagatacaagaagctgcagcaggagctggagttcctggaggtgcaggaggagtacatc
aaagatgaacagaagaacctaaagaaagagtttctccatgcccaggaggaggtgaagagg
atacagagcatcccacttgtcattggccagttcctggaagctgttgatcagaacacagcc
attgtcggctccaccacagggtccaactactatgtgcgcatcctgagcaccatcgaccga
gagctgctgaagcccaacgcctcagtggctttgcacaagcacagcaatgctctggtggat
gtgctccctcctgaagctgacagcagcatcatgatgctgacgtcagaccaaaagccagat
gtgatgtatgctgacattggtggtatggacattcaaaagcaggaagtccgagaagctgta
gagctgcctctcacacactttgagctctacaaacagattggcattgacccacccaggggt
gtccttatgtacggacctccaggttgtggtaagaccatgttggccaaggctgtggcacat
cacactacagcggcgttcatccgtgtggtgggctctgagtttgttcagaagtatttgggt
gagggcccccgtatggtgcgtgatgtcttcaggctggcaaaggaaaatgctccggccatc
atcttcattgatgagatcgatgccatcgccacgaagcgttttgatgcacagactggagct
gatagggaggtgcagagaatcttacttgagctgctcaatcaaatggacggctttgaccag
aacgtcaatgtcaaggtgatcatggccaccaacagagcagacacgttggacccggccctg
ctgcgtcctggtcgtctggacagaaagattgagttccccctgcccgaccgcaggcagaaa
cgtctcgttttctccacaatcaccagtaaaatgaatctctctgaggaggtggacctggag
gactatgtggcgagaccagacaagatctctggagccgatatcaactccatctgccaggag
gccggcatgttggcagtacgtgagaacagatacatcgtcctggccaaagattttgaaaaa
gcttacaagaccgtcatcaaaaaggacgagcaggagcacgagttctacaagtag
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