Anoplopoma fimbria (sablefish): 129109088
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Entry
129109088 CDS
T09102
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129109088 (lingo4b)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129109088 (lingo4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_LRWD1
ig
LRR_9
Ig_2
LRRNT
V-set
Ig_5
C2-set_2
LRR_Zer-1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
129109088
NCBI-ProteinID:
XP_054477005
LinkDB
All DBs
Position
20:25695062..25696927
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AA seq
603 aa
AA seq
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MFVESVVRWGAWSILLQFGLGASAGSCPPRCVCRPEAKEVICSGKHLNSVPEGFSGDAKR
LDLSHNKIKTVGRRQFSGLLQLQELDFSDNIISMIEIEAFQGLQNLRTLRIKNNRLKIIP
VGVFSGLSSLRLLDLSQNEILVFLDYTFKELVNLQTLEAEENDLVFISQRAFFGLQNLQE
LNIDRSNLTSVPTEALSQLQSLARLRMLRLTITTLPNNAFRRLHRLRSLLIANWPLLDTV
ASNSLIGLNLTSLVISSCNISTVPYSALRHLVYLRNLDLSYNPIAVIQGNLLGDLLRLQE
LHLAGGNLLRIEPGAFRGLAYFRILNVTSNQLTSLEESVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPTCSSPDAVRQREFKDFSEKELPRLFTCRPARVMDRRPQEAR
VEEGTTVLFSCKADGDPFPSITWISSHKNLVTPTGRIRVLPNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPFFSEEGWVEPSNSQAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGEGGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcagtggtacgatggggggcttggagcatcctgcttcagtttggactg
ggtgcatctgcaggaagctgtcctccacgctgtgtgtgccgacctgaggccaaagaagtt
atctgctctggcaaacatttgaactcagtgccagagggcttttccggtgatgccaagcgt
ttggatttgtctcacaataagattaagactgttggccgccgccagttctctgggctcctg
caacttcaagagttagatttcagtgataacataatctccatgattgagatagaggctttc
cagggcctacagaatctcaggacgctccggattaagaataaccgactcaagatcataccg
gttggggtgttttctggcctgtccagtctgcgtcttcttgatttgagccagaatgagatt
ctggtcttcctggactatacattcaaagaactggtcaacctgcaaacgctggaagccgag
gagaatgacttggtcttcatctcccagcgagctttctttggtctgcagaatctgcaggag
ctcaacatagaccgcagcaacctgacctccgttcctaccgaggcgttgtcccagctccag
agcctggcgcgtcttcgcatgttacgcctcaccattactacgctgcctaacaacgctttc
cgacgactgcaccggctgcgtagcctcctgatagcaaactggccattattggacactgtg
gctagcaacagcctgattggtcttaatttgacctcgcttgtcatcagcagctgcaacata
agtactgttccttactcagcacttcgtcacctggtgtatctgcgcaacctggacctgtcc
tacaaccccatcgctgttatccagggtaatctgctaggggacctgctaagactccaggag
ctacacctagcaggggggaacctgctacgaatagagccgggggcctttaggggactggcc
tattttcgcatacttaatgtgacatccaatcagctcacttctttggaggagagcgtcttc
cactctgtggggaaccttcaggtgttgcggttggatgggaatcccctagcatgtgactgc
cggcttctttgggtggtccgtcgtcgattgcgcttgaactttgatggacatcagcccact
tgttcgtcccccgatgcagtgagacagcgtgaattcaaagacttctccgagaaggagctc
ccgaggctgtttacttgccgccctgcccgtgtcatggaccgcagaccgcaggaggcaaga
gtagaggagggcactactgttctcttctcctgtaaggccgatggcgatccattcccatcc
atcacctggatctcatcccataagaacttggtaactccaacaggacgcataagagttctg
cccaatggaaccctagaagtgcgttttgcccaagttcaggacagtggcacatatcagtgc
ctggcaggcaatgcagccggcaatgacagcctgacagtcggtttgtacgttaaggggctc
cctcgtaaccgaaccatcccgttcttctcagaggagggctgggtagagccttcaaactcc
caagccgccaactcctcagctcaaatggctaaaccttacccgtttgacgcaaagaccctg
atcatcgccaccaccatgggcttcctgtctttcctcagctcagtggccatctgttttgtc
ttcatgttcttctggagccagagcaaaggtcagatcaagcacacagcaactattgacttt
gttcctcggtcttcaatgggtggtggaggggaaggaggcgatggtggcaggttcaccatg
aaacttatttaa
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