Anoplopoma fimbria (sablefish): 129109093
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Entry
129109093 CDS
T09102
Symbol
arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129109093 (arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129109093 (arnt)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129109093 (arnt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_NCOA
PAS_2
HAUS2
Motif
Other DBs
NCBI-GeneID:
129109093
NCBI-ProteinID:
XP_054477010
LinkDB
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Position
20
Genome browser
AA seq
793 aa
AA seq
DB search
MLFQADMSSSNPELPDPNLGMGASGAQGSGGAVVPKGTNKRRAAPDFDDDDDDEGNKLFR
CDDETGGGNDKERFARLLEEDQSFADKEKQARENHSEIERRRRNKMTAYITELSDMVPTC
SALARKPDKLTILRMAVSHMKSLRGSGNTNSDGSYKPSFLTDQELKHLILEAADGFLFVV
SCETGRIVYVSDSLTPVLNQAQSEWLGSSLYDQLHPDDTEKLREQLSTAENNNTGRMLDL
KTGTVKKEGQQSSSRMTMGARRSFICRMRCGSCPVEPMSMNRLNFLRNRNRNGLGTAKEG
EPQYVVVHCTGYIKSWPPSGVSLTDDESDNTQGSRYCLVAIGRLQVTCCPGETDINSISV
PVEFISRHNCQGMFTFVDHRCMAAVAYQPQELLGKNILEFAHPEDQGLLRDSFQQVVKLK
GQVLSVMFRFRSKSREWIWMRTSSFTFQNPFSEEIEYIICTNVNVKNSTQDPLTPISSPV
GLLPPSLGQSSPNCPPVMLSPGQVATRQLQQQQAELEGGGARDGLYEAGPIALSQMPVQP
VTAAGPDLSKSLEKPELYPSLFQGPDQTKGLPSTSTPTTQIYPPANSFAAGRSNDAYRPL
NMTPQMAQPSHSAGQMLAQISRQNGAPQSVTPSSTGSPLHGGPAGGWPVAAAGVRPQFNN
QQVAPQAAKTMSPQFAPIVGFGGGSSNSFSHMPTGAAPTQTNNANYPPINAHANLNTNGY
DGSRSGPQFPSQAVEAVWPQWQGQQHSQSNAEQHPRAQGNQQDMFPDVLSMLDQPANFNG
DDFEIPLYSSFDQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgttattccaggcagacatgtcctcttcaaacccagagttaccagacccaaatctgggt
atgggggcaagtggggcccaaggaagtggtggggctgttgtaccaaaggggaccaacaaa
agaagagctgcgcctgactttgatgatgatgatgatgatgaaggaaacaagttgttcagg
tgtgatgatgaaacaggaggtggcaatgacaaagagcgctttgccaggcttttggaagaa
gatcagagttttgcagataaggaaaaacaagccagggagaaccacagtgagattgagagg
cgaaggcggaacaagatgacggcctacatcacagaattgtcagacatggtgcccacctgc
agtgcactagcaaggaagccagacaaactaactatcctgcgaatggccgtgtcccatatg
aaatctctaaggggaagtggaaataccaactcggatgggtcgtacaaaccttcctttctc
actgaccaggaactgaagcacctcatcctggaggcagccgacggcttcctgttcgtggtg
tcatgcgagactggccgcattgtttacgtctctgactcgctgacacctgtcctcaaccag
gcacagtctgaatggcttggctcctccctgtatgaccagctccatccggatgacacagaa
aagctcagagagcagctttctactgccgagaataacaatacagggaggatgttggacttg
aagacaggaacagtgaagaaagaaggccagcagtcgtcatccagaatgactatgggagcc
cgtcgatcattcatatgcagaatgaggtgtggctcttgtcctgtggaaccgatgtccatg
aacagactgaacttccttaggaatagaaacaggaatggtttgggtacagccaaggaagga
gaaccccagtatgtagtggtccactgtacaggatacatcaagtcctggcccccttcagga
gtatcattaacagacgatgaatcagacaacactcaggggagtcgctactgtctggttgca
atcgggagattacaggttacttgttgcccaggtgagaccgacatcaacagtattagtgtt
ccagtggagttcatctcacgccataactgtcagggcatgttcaccttcgtagaccaccgc
tgcatggcagctgtcgcctaccagccacaggaattattggggaagaatattctcgagttt
gcccaccctgaagaccagggcttactgagagacagcttccaacaggtggtgaagctgaag
ggccaggtcctgtcagtgatgttccggtttcgctccaaatcgagagagtggatctggatg
agaaccagctccttcaccttccagaacccgttttcagaggagattgagtatataatctgc
accaatgtcaatgtcaaaaactcaactcaggaccccctcacacccatctcctccccagtc
ggcttgctgcccccctctctgggtcagagcagcccaaactgccctcctgtaatgctcagc
cctgggcaggtggccaccaggcagctacagcagcagcaggccgagctagagggaggtggg
gccagagacggactgtatgaggcaggaccaatcgccctctcacagatgccggtgcagcca
gtgacagcagcagggccggacctcagcaagagccttgagaagccagagctctacccctcc
cttttccaaggcccagatcagaccaagggcctgccctccacctccactcccaccacacag
atctatcctccagccaatagcttcgctgctggtcgttccaatgatgcatacaggcccctc
aacatgactccacagatggcacaaccctcccactcagcagggcagatgctggctcagatt
tctcgtcagaatggagccccacagtcagttaccccctccagcactggcagcccccttcat
ggaggaccagcaggaggatggcctgtagctgcagctggagtcagaccacaatttaataac
cagcaggtggctccccaggctgcaaagaccatgtctccacagtttgctcccatagtagga
tttggcggtggctcttccaactcttttagccatatgccgacaggtgccgctcccacccaa
accaacaacgcaaactacccgcccattaatgcacatgcaaatctcaacaccaatggttat
gatggctctcggtctgggccgcagttcccctctcaggcagtagaggcagtgtggccccag
tggcaaggccagcagcactcgcagagtaatgcagagcagcatcctcgcgctcagggcaac
cagcaagacatgtttcctgatgtgttgtctatgctggaccagcctgccaacttcaacggc
gacgactttgagattcccctgtactcctcgtttgaccagtga
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