Anoplopoma fimbria (sablefish): 129109100
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Entry
129109100 CDS
T09102
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129109100 (rnf115a)
04121 Ubiquitin system [BR:
afb04121
]
129109100 (rnf115a)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129109100 (rnf115a)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129109100 (rnf115a)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129109100 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
C1_2
zf-C3HC4_3
HypA
Motif
Other DBs
NCBI-GeneID:
129109100
NCBI-ProteinID:
XP_054477020
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All DBs
Position
20:complement(16322893..16329962)
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AA seq
326 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGVANGIDDAAT
QFAEVEADLTDFGENSLWHLLLLERPFTAEGDTPDSEPRLPGGRLGVSVTWGVGRGTNRG
SVPAGLGGPMGGLLGAGEHWGPGRPPRLNSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLF
ANSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSIPT
VNISQEQADCCMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSLNG
EDSSSQPPSEPPTLSMDPRTQERWSF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttccaccgcatcggtttttctgtcactgttgtaagggagaa
gtgaaccccaaactcccggagtatatctgtccaagatgtgactcaggatttatagaggaa
gtaacagaagattccagtctcctagagggtgtcgctaacgggatagatgacgcagccaca
caatttgcagaggtagaagctgacttgacggattttggggagaactcgctatggcacctg
ttgttactggagcggccgtttacagcagaaggtgacacacctgactcagaacctcggctc
cccggagggcgcttgggggtctcagtgacctggggggttgggagggggaccaatcggggg
tcagtcccagcaggcctagggggacctatggggggtctactaggagctggggaacactgg
ggaccaggacgtccccctcgcctgaacagccagaggagataccggtccagaggcagcagt
agaccagaccgctcgcctgctgtggaggggattgtacaacagtttctcgctggcctcttt
gcaaactctggagtccctggctcaccccccctctcatggacggggatgctgcactctaac
ccgggagattacgcctggggacagggagggttagacgccgtgataacacagttactaggt
cagttggagaacacaggacctcctccagcagagaaagagaagatctcttctatcccaact
gtcaatatctctcaggaacaagcagactgctgtatggaatgtccggtttgcaaagaggac
ttcgcagtgggagagccagtcagacagctaccctgtaaccacttctttcattcagactgt
atagtaccatggctggaaatgcatgacacatgtccagtgtgtaggaagagtttgaacgga
gaagacagcagcagccagcccccatcagagccccccaccctctccatggacccccgcaca
caggagagatggtccttctga
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