Anoplopoma fimbria (sablefish): 129109102
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Entry
129109102 CDS
T09102
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129109102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129109102
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
129109102
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
129109102
NCBI-ProteinID:
XP_054477030
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All DBs
Position
20:complement(19566108..19584472)
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AA seq
730 aa
AA seq
DB search
MRKPVPQKAIEWKDARRIKQARSGRPSRVLSQYQGLFSWEKYLKETGAAAAPSSCFRQSL
TPPLNEFKAGMKLEALDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGNCEKSGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPAPEQNSFQLG
MKLEAIDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCALTGD
NLQPPGTKVVLPKSLGALTDGSVESPAMHPPPTVGRPPGQRGRKPGRRKTKVTGLWNQKG
AALGPQSIQPGKGLEPIKIPKKRGPKPGSKQLGWAKRAGWLEDAMAGPGRPVTGPGRTRG
RLPANWAQTIALQQAQTQAEPIKIPKKRGPKPGSKRKPRVVPNPVPTSPTSSTPEPDTST
VPMDNATIPNSALQAPTVCVYLNKYSKVGPHLDQRRVQQLPDHFGPGRASSVLQQCVQAC
VDSAHNQSTVFSCLKSGQGGEVISAFFNQQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDP
LFGSQPVARGGLHYDSHTYTTERRGFGDSLTTGLGLGTKRFLQDYNSALPHKLSKIPRHS
TDGESLMENSVATSEHLKKSPLSPNTTVQSPGLRSPSKLLRHNNSTGSGSFRESPRPSGQ
DPNLWTVEDVMQYIRDIDPVLAPHSDLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKL
IFHIDKLKRA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacctgtgccacagaaagctatagagtggaaagatgccagaaggatcaagcaa
gcccggagtggacggccctcccgggtgctctcacagtaccaagggcttttcagttgggag
aaatacttgaaagagacgggcgccgctgctgcaccctcttcttgcttcagacagagcctc
acgcctccactcaacgagttcaaggcagggatgaagctggaagccctggacccgcgaaac
accacgtccacgtgcatcgccacggtggtgggcctgacgggctcgcggctgcggcttcgc
ttggacgggtcggacaacaagaacgacttctggcgcctcgtggactcctcagagatccag
ccgatcggcaactgtgagaagagcggaggcatgttgcagccgccacttggtttccgtctc
aatgcgtcgtcttggccgatgttccttctgaaaacattaaatggagctgagatggctccc
tctcggatctttcacaagcaggagcctcccgccccggagcagaactccttccagttaggc
atgaagctggaggcgatagaccgtaaaaatccccacttcatctgcccggctacagtgggt
gcactgcgtggtgttgaggtgctggtcacctttgatggttggcggggagcctttgactac
tactgccgctacgactcgcgtgacatcttccctgttggctggtgcgccctcaccggagac
aaccttcagccgcctggaaccaaagtagtgctgcctaagagccttggggcgttgacagac
gggagtgtggagagcccagccatgcaccccccgcccacggtgggcagacctccaggtcag
agaggacggaagccaggccgcaggaaaaccaaagtgacagggctctggaatcagaagggt
gcagcgttgggaccgcagagtatccagcccggcaaaggcctggagcccatcaagatcccc
aagaaaagagggcccaagcctggcagtaagcagttgggctgggcgaagcgagctggctgg
ctggaagatgccatggcgggtccaggacggccagtgacgggcccggggcgaaccaggggc
agactgcctgcaaactgggcacagaccatagccctgcagcaagcccagactcaggcagaa
cccatcaagatcccaaagaaaagagggccaaagcctggtagcaagagaaaaccccgcgtg
gtacctaatccagtccccacgtctcctaccagcagcaccccagagcctgacaccagcacc
gtgcctatggacaatgccaccatccccaactctgcactacaggctcccacagtttgtgtg
tacctaaacaagtacagcaaggtgggaccccatctggaccagcggcgagtccagcagctc
ccggaccactttgggcctggccgggcctcctcggtacttcagcagtgtgttcaggcttgt
gttgactccgcccataaccagagcacagtcttctcctgcctcaagtctgggcaaggaggc
gaagtcatatcagccttctttaaccagcagcagcacaccctgaccctgccaacagtcagc
agtgtcacctacgtcctccgcttcctggaaaaactctgccacaaccttcactgcgatcct
ctgtttggcagccagcctgtagccagaggaggcctgcactacgacagtcacacatacact
acagagagaagaggttttggagacagcctaacaacgggcttaggcctcggcaccaagcgg
tttctccaggattataacagtgcacttccccataaactgtccaaaatcccccggcactcc
actgatggtgagtccctcatggagaacagtgttgccacatcagagcacttaaagaagagc
cctctctctccaaacacgacggtacaatctcccggcctgaggtctccctccaagctgctg
cgtcacaacaactccacaggctcaggcagtttccgggagagcccgaggccaagtggtcag
gaccccaacctgtggacagtggaggatgtcatgcagtatatcagagatatcgacccagtg
ctggcaccacattctgacctgttccgaaaacatgaaattgacggcaaagcactcctgtta
ctgcgtagcgacatgatgatgaaatacatgggcttaaagctcggtcccgccctcaaactt
atcttccacatcgataagctcaaacgggcctga
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