Anoplopoma fimbria (sablefish): 129109108
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Entry
129109108 CDS
T09102
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129109108 (tp53bp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
DUF4537
Tudor_2
Motif
Other DBs
NCBI-GeneID:
129109108
NCBI-ProteinID:
XP_054477049
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All DBs
Position
2:complement(3510756..3535691)
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AA seq
1733 aa
AA seq
DB search
MDPGGSDLDFSLPQPETPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPSSRSPVL
ELISSPLGSRYSQSDSQSESSQSNNQAEPGVLMAANPSSAFEEESQVLNICPPNKKKCAP
EDTDMDSGADSTTHCIQSEGGTSQFGFLELSQSQDLRGEVVNSREEEADVVAQTDSERRS
KLAEQNVSSRTSESQDNKAVRSEVSSSSSLESSGQSGRQLGIQALLHSEGLQASDEQDCE
ILSSQQDMFDADKTGAAVDSTVSEPEQQGHPTPTPAQSLQLLHLSGQGTLVQESLSQSSI
DYVAPTPDNFTHTPLIIPNSPTGPENEHGADEPMDTSLPPEGRGGEKEEEPMETEAASKP
HPSASTPISQNSPDFVMEQTLSLPSQPEFSHDVFVPTQSQEAPQQSDKKTGETQSQRLAS
TSFTLPLQLSCSSPALKTSEHIEEDSQATQIEELGEPPGVDAGDSAVTHQRSESNGVAPE
SQTPTSSKAATSAESTKHRSECTENEPSDAAQKPEVNKKTSLNVENVNVKDGKSDGKQAS
PADVVSCSQPKLDSSLTVNSCVQETPNTDASPRSLTSPSMVSQKSAVNVAKSSVDLRKDG
GSAKSPSAKASSQKCGAVGNSQTVKEVTDERKQGEVVEEDVVMEEGSGVALVQLLSHEPM
EEEEEESEKRGDDSVIIVTDSERDSEVLQKDVTPPPKTSSSQTVGGKAPVSTNGHQSKAQ
EKKVHAVPDRLSQNERAGPEPEGLKDKSLSDSSGEISFHFTLPKEGELIGPAVGATPPLI
NQLKQTLRHSTPIEITSFSEKSGVGGDGAMAASDIVSGESGDDTTTEKGDGKLSLRMKLV
TPVEEGSSERFSLQKPTLSEEDGSVAKVTTVAKAVTSSPSVFSRVRQVHRQQEAREDIQA
GGNSTPVRGQLFASPQRSSQASSLGCNSLPNSQSEPSQQEVLAASQETRKAPPGPAEHSE
DRRGPTKAPEPPAPNRTDARQKVAQQSSDSTVTSTPSNKLRQRTVSLQTSFDAPGLRSPA
ARGEPESPSFRRTAAPAHRRHVRTIQEVRTTVTRIITDVYYEDGKEVERKVTEENEEPVV
DCQVLDGDISPCRTGSSSVTSGDLADISSLSSKASSLQHSSGGTSSSGFTRPDFIMPPRR
GAFSPRRGGGQQQRGHRGHRAGSVVTASRGYGTLGSQAFAPLTPRGRARRGRPPSRSSMS
RGGAFGSLPRLGVHSQPHFSSEDEHFTRMLPPRLPVSPADADLHSRSDSLRSSPEEANSA
GSSFVGLRVVAKWTSNGYFYSGRIIKDAGEGSFRLRFDDGYECEVAGKDILLCDPIPLET
EVTALLEDEYFSIGVVRGHKTEGPDLFYSVEKDGQRQWYNRTAIILSLEQGNKLREQHSL
GPYEPAMPLAKASDISLDNLVEGKRRRRGAPEGQNTPNRSSSSSSPRTPGPSGKRKLMSS
EDHRTPAKRGRRGMGARAAQRVAVCNTSGSGTDLPGRSGDVAETHGPLPQNTTLFMGFAF
MLTASSEIDRLTNKNASDDEEGEDDYVQTGPYNKTYTESQLQTGGGFVLQDFNEEQCKAA
YQSLLIADQHCRTRKYLLCLASGVPSVSHIWVRDCCKDNKLLNYRNYLLPAGVGPDEAIV
EWHPRCSPFKTLRVLLVFEKPVELWAQLIGMGGGSSVRQFPADKDVSDIPAGKYDVVVTD
RACPASVEKNMTSQEVPLVSPEWIIQSVIRGERLGFHSKPQYHHDYSSSSSSS
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtgggagtgacctggacttcagcctgcctcagcccgagaccccgtgtctg
atcgtggaggactctcagccggacagcgtggccctggaggacgaccccgagagcagctac
agagccctgctggcccgccgcctgtccagcctgcagccctcctcccgcagcccggtgctg
gaactgatatcctccccacttggaagcagatactctcagagtgacagccaatcagagagc
tcccagagtaacaaccaagctgaacctggcgttctcatggcggccaaccccagttctgca
ttcgaggaggaaagtcaggttctaaacatctgccctccgaacaagaagaagtgtgcacca
gaggacactgatatggattctggagccgattctaccacacactgcattcagtctgaaggg
ggaacctctcagtttggtttcctggagctctctcagagtcaggatctgcgaggtgaagtg
gtgaacagtcgggaggaagaagcagacgttgtggctcagacagacagcgagagacgctcc
aaactagcagagcagaacgtcagctccaggacttcagagagtcaggacaacaaagcagtg
aggtctgaggtgagctccagcagctcattggagtcttcgggtcagtcggggaggcagctg
ggcatccaggctctgctgcactcagagggcctccaggcctccgacgagcaggactgtgag
atcctgtcctcacagcaggacatgttcgacgccgacaagacgggtgctgcggtggacagc
accgtgtccgagccggagcagcagggtcacccgaccccgacgccggcacaaagcctgcaa
ctgctgcacctgtctggacagggaacactggtgcaggaaagtctgtcccagagctccatc
gactacgtcgcccccaccccagacaacttcacccacacccctctaataatccccaactcg
cccaccggaccagagaacgaacacggcgctgatgaaccgatggatacttcgctgccccca
gaaggccgagggggagaaaaggaggaggagccaatggaaacggaggccgcctctaagcca
cacccatccgcctctactcccatctctcagaattcccctgattttgtgatggagcaaact
ctctctttaccctcccagccggagttctctcatgacgtgtttgtcccgacgcagagccag
gaggcgccgcaacagtccgataagaagacgggcgaaacgcagtctcaacgtctggcgtcg
acttccttcactcttcctctgcagctctcctgcagtagtccagctctgaagacctccgaa
catatcgaggaggacagccaggccacgcagatcgaggagctgggagaaccgcccggtgtc
gacgccggcgactcggccgttacacatcagaggagcgagagcaacggcgtcgctccggag
tcacaaactcccaccagttcaaaagctgccacctcggccgaatcgacgaagcatcgcagc
gaatgtaccgagaacgagccgtcggatgcggcgcaaaaacctgaagtgaacaaaaagact
tctttgaatgtagaaaatgtgaatgtgaaggacggtaagagcgacggcaaacaggcgagc
cctgctgacgtggtgtcgtgctcgcaaccaaagctggattcctctctgactgttaacagc
tgtgtgcaggagactcccaacacagacgcttcacctcgcagtctgacctctccgtccatg
gtctctcagaagtctgctgtgaatgtggcgaagagttctgtagacttgaggaaggacgga
ggaagtgcaaagagtccgtccgccaaagcatcgtctcagaagtgcggagctgttggtaac
agtcaaacagtgaaggaggtgacggatgagaggaagcagggtgaagtagtggaggaggat
gtggtgatggaggagggttcgggtgtggctctggtccagctgttgtcccatgaacccatg
gaggaagaggaggaggagagtgaaaagcgaggtgatgacagcgtcatcattgtcacagac
agcgagagagactccgaggttcttcagaaagacgtgacgccgccaccgaagaccagcagc
tcccagacggtcggaggcaaagcgcccgtctccaccaacggccatcagtccaaggctcag
gagaagaaggtccacgccgttcctgataggctctcccagaatgagagggcggggcctgaa
ccagaggggctcaaagacaagagtctgagtgacagctcgggagaaatttctttccacttc
acgcttcctaaagaaggggagctgattggtcctgctgttggagccacgccccctttaatc
aaccagctgaagcagacgctgagacacagcactcccatcgagattacttccttctctgag
aagtccggcgtggggggtgatggtgcgatggcggccagtgacattgtgtcgggggaaagc
ggtgatgacaccacgacggagaagggagacgggaagctgagtttgaggatgaagctggtg
acccccgtggaggagggcagctcggagcgcttcagccttcagaagccaacactatcagaa
gaggatggatccgtcgccaaggttaccactgttgccaaggccgtaaccagcagcccgtcg
gtgttcagtcgtgtcagacaggtgcacagacagcaggaagccagagaggacatccaggct
ggaggcaacagcacacctgtcagagggcagctgttcgcctccccacagaggagctcccag
gcgtcctcgctgggatgcaacagcctccccaacagccaatcagagccttcacagcaggaa
gtgttggcagcatcgcaggagacccgtaaggctcctccaggccccgccgagcactctgag
gacagacggggtccgactaaagctccagaaccgcccgcccccaaccggacagacgccaga
cagaaggtcgcccagcagagcagcgacagcaccgtcacctccactccgtccaacaagctc
cgtcagcggactgtctccctgcagaccagcttcgatgcaccggggctgagatctccagcc
gccaggggagaaccagagtctccgtcctttagaagaacagcagcccccgcccaccgcaga
cacgtacgcaccatccaggaagtgcgtaccaccgtcacacggatcatcacagacgtgtat
tatgaggacggcaaggaggtggagcgcaaagtcacagaggagaacgaggagcccgtggtg
gactgccaggtgttggacggcgacatctccccgtgccgcacgggcagcagctccgtgacc
tccggtgacctcgccgacatcagctctctgtcgtccaaggcctccagcctgcagcacagc
tccggaggaaccagcagcagcggcttcacgcggccggacttcatcatgccgcctcgccgt
ggggccttcagtcccaggaggggaggcgggcagcaacagaggggtcacaggggtcaccgg
gcggggtcagtggtcacagcgagccgaggctacggcaccctggggtcccaggccttcgcc
ccgctgacccccagagggagggccaggaggggccgacccccgtcccgctcctccatgagc
aggggaggcgctttcggctcgctgccgaggctcggcgttcacagccaaccacatttctcc
tcagaggacgagcacttcacccgcatgctccccccacgcctccccgtcagccccgcggac
gccgacctccacagccgctccgactccctccgctcgtctccggaggaggccaactcggcc
ggcagcagcttcgtgggcctgcgggtggtggccaagtggacgtccaacggctacttctac
tcgggccgcatcatcaaggacgccggcgaggggagcttccgcctgaggttcgacgacggc
tacgagtgtgaggtggcggggaaggacatcctgctgtgtgatcccatcccgctggagacg
gaggtcaccgcgctgctggaggacgagtacttcagcataggtgtcgtgcggggccacaaa
accgagggtccggatctgttctacagcgtggagaaggacggacagaggcagtggtacaac
aggacggccatcatcctgtctctggagcagggcaacaagctgagggagcagcacagcctc
gggccctacgagcccgccatgccgctggccaaggcctccgacatcagcctcgataacctg
gtggaggggaagaggaggcgcagaggagcccccgagggtcagaacacccccaaccgcagc
tcctcctccagcagccctcgaacccccggaccctccggaaagaggaagctgatgagctcc
gaggaccacaggacgccggccaagagaggccgccggggcatgggcgcccgagccgctcag
cgggtcgcggtctgtaacacctccggcagcggcaccgatctccccggtcggtccggagac
gtggcggagactcacggcccgctgccccagaacaccaccctcttcatgggcttcgccttc
atgctgacggcctcgtcagagatcgaccggctgaccaacaagaacgccagcgatgacgag
gagggtgaggacgattacgtgcagacgggtccgtataacaaaacgtacacagagtcccag
ctgcagacgggtggaggcttcgtcctgcaagacttcaacgaagaacaatgtaaggcggcc
taccagagtctgctgattgcagaccagcactgtcgcaccaggaagtaccttctgtgtttg
gccagcggtgtgccgagcgtgtcgcacatctgggtgagggactgctgcaaagacaacaag
ctgctcaactacaggaactacctgctgcccgccggggtggggcccgatgaggccatagtg
gaatggcatccgcgctgcagcccgttcaagactctgcgggtccttctggtgtttgagaag
ccggtggagctttgggcacagctgatcgggatgggtggaggctcctccgtccgacagttc
ccggcagacaaagacgtctcagacattcctgccggcaagtacgacgtggtggtgacggac
cgcgcctgtccggcatcggtggagaaaaacatgacatcacaggaagtcccgctggtgtct
ccagagtggatcatccagagcgtcatccgcggggagcgcctgggtttccatagtaagcct
cagtatcaccatgactactcctcctcctcctcttcatcataa
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